Factsheet for GSMUA_Achr1P14290_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35625	Soybean	vacuole	72.97	72.97
VIT_03s0088g00650.t01	Wine grape	extracellular, vacuole	71.62	71.86
KRG91154	Soybean	extracellular	71.62	71.62
Bra040716.1-P	Field mustard	vacuole	68.92	68.69
CDX71167	Canola	vacuole	68.58	68.35
AT2G14620.1	Thale cress	vacuole	67.57	66.89
Solyc01g106650.2.1	Tomato	extracellular, vacuole	63.85	64.51
PGSC0003DMT400013128	Potato	extracellular	32.43	60.0
GSMUA_Achr10P...	Banana	cytosol	37.16	55.28
GSMUA_Achr9P13820_001	Banana	cytosol	37.84	53.59
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	38.18	53.55
GSMUA_Achr3P05220_001	Banana	cytosol	36.82	52.4
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	34.12	52.33
GSMUA_Achr7P16430_001	Banana	cytosol	37.16	51.64
GSMUA_Achr5P21880_001	Banana	cytosol	36.49	50.7
GSMUA_Achr8P19740_001	Banana	extracellular	43.24	47.58
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	31.42	47.21
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	44.59	46.98
GSMUA_Achr5P19320_001	Banana	vacuole	44.59	46.48
GSMUA_Achr8P34300_001	Banana	cytosol	42.91	46.35
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	45.95	46.1
GSMUA_Achr8P26470_001	Banana	extracellular	44.26	45.8
GSMUA_Achr8P05120_001	Banana	extracellular	43.92	45.45
GSMUA_Achr3P26220_001	Banana	extracellular	43.92	45.45
GSMUA_Achr3P03390_001	Banana	extracellular	44.59	44.9
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	40.88	44.81
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	40.2	44.57
GSMUA_Achr10P...	Banana	extracellular	42.23	44.33
GSMUA_Achr6P30850_001	Banana	extracellular	42.23	44.33
GSMUA_Achr1P08500_001	Banana	extracellular	40.2	43.91
GSMUA_Achr10P...	Banana	extracellular	42.23	43.4
GSMUA_Achr7P10940_001	Banana	extracellular	40.2	42.81
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	40.2	26.92

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr1G14290_001	EnsemblPlants:GSMUA_Achr1P14290_001	EnsemblPlants:GSMUA_Achr1T14290_001
InterPro:IPR000757	UniProt:M0RZT7	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF37	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI00029592CC
InterPro:XET_C	InterPro:XTH	SEG:seg	:	:	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 10 [Source:GMGC_GENE;Acc:GSMUA_Achr1G14290_001]

Coordinates

chr1:-:10897970..10899471

Molecular Weight (calculated)

34181.6 Da

IEP (calculated)

8.537

GRAVY (calculated)

-0.338

Length

296 amino acids

Sequence
(BLAST)

001: MVYCVCNKAT LLISLLSISI VRFGLASVVS TGDFNTDFHI TWSPSHVNTS ADGHSRTLML DQESGSSFAS NNMFLFGEID MRIKLILGYS AGTVLAYYLT
101: SDRPNRDEID FEFLGNVTGQ PYILQTNIYA DGSGNREERI YLWFDPTKDF HTYSIFWNLY QIVLMVDWVP VRVYRNHADE GVAFPRWQPM TLKASLWNGD
201: SWATRGGEDK VDWSKGPFVA TLGDYKIDAC VWKGNPRFCR AGSNSNWWNK PRLRSLTGRQ RRLLKWVRKY HLIYDYCQDP KRFHGQLPTE CSLPKY

Best Arabidopsis Sequence Match ( AT2G14620.1 )
(BLAST)

001: MTLINRSKPF VLLVGFSIIS SLLLWVSQAS VVSSGDFNKD FFVTWSPTHV NTSNDGRSRT LKLDQESGAS FSSIQTFLFG QIDMKIKLIR GSSQGTVVAY
101: YMSSDQPNRD EIDFEFLGNV NGQPYILQTN VYAEGLDNRE ERIHLWFDPA KDFHTYSILW NIHQIVFMVD QIPIRLYRNH GEKGVAYPRL QPMSVQASLW
201: NGESWATRGG HDKIDWSKGP FVASFGDYKI DACIWIGNTS FCNGESTENW WNKNEFSSLT RVQKRWFKWV RKYHLIYDYC QDYGRFNNKL PKECSLPKY

Arabidopsis Description

XTH10Probable xyloglucan endotransglucosylase/hydrolase protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVK1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.