Factsheet for GSMUA_Achr9P11180_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	62.63	83.41
GSMUA_Achr9P13820_001	Banana	cytosol	53.38	71.77
GSMUA_Achr10P...	Banana	cytosol	49.82	70.35
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	48.04	69.95
GSMUA_Achr3P05220_001	Banana	cytosol	51.25	69.23
GSMUA_Achr7P16430_001	Banana	cytosol	51.6	68.08
GSMUA_Achr5P21880_001	Banana	cytosol	51.25	67.61
GSMUA_Achr10P...	Banana	extracellular	65.84	65.6
GSMUA_Achr6P30850_001	Banana	extracellular	64.77	64.54
GSMUA_Achr10P...	Banana	extracellular	65.12	63.54
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	43.77	62.44
GSMUA_Achr8P34300_001	Banana	cytosol	52.31	53.65
GSMUA_Achr8P19740_001	Banana	extracellular	48.75	50.93
GSMUA_Achr5P19320_001	Banana	vacuole	50.53	50.0
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	46.98	49.44
GSMUA_Achr3P03390_001	Banana	extracellular	50.89	48.64
GSMUA_Achr8P05120_001	Banana	extracellular	49.47	48.6
GSMUA_Achr3P26220_001	Banana	extracellular	49.47	48.6
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	46.62	48.52
GSMUA_Achr8P26470_001	Banana	extracellular	49.11	48.25
GSMUA_Achr7P10940_001	Banana	extracellular	46.98	47.48
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	49.82	47.46
GSMUA_Achr1P14290_001	Banana	vacuole	46.98	44.59
GSMUA_Achr1P08500_001	Banana	extracellular	42.35	43.91
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	45.2	28.73

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr9G11180_001	EnsemblPlants:GSMUA_Achr9P11180_001
EnsemblPlants:GSMUA_Achr9T11180_001	InterPro:IPR000757	UniProt:M0TZC7	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899
SignalP:SignalP-noTM	UniParc:UPI0002958826	InterPro:XET_C	InterPro:XTH	SEG:seg	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:GMGC_GENE;Acc:GSMUA_Achr9G11180_001]

Coordinates

chr9:+:7279763..7280909

Molecular Weight (calculated)

31122.6 Da

IEP (calculated)

7.375

GRAVY (calculated)

-0.279

Length

281 amino acids

Sequence
(BLAST)

001: MAKLSLIRAS FMAAMVVASA SANFLSDVDI TWGDGRGKML DNGELLQLTL DRASGSGFQS KQAYLFGRFD MKMKLVPGNS AGTVTTYYLS SQGPAHDEID
101: FEFLGNTSGE PYVLHTNVFA QGKGDREQQF YLWFDPTLAF HTYSVLWNPR RIVFYVDGTP VRVFRNSEGA GVAYPKSQAM RVYASLWDAD DWATRGGLVK
201: TDWSQAPFVA SYRGFVADAC VAASGRPSCS ASKAGWWDQG LDSGGARKLK WVRDNYMVYD YCRDAKRFPG GFPPECSQPL D

Best Arabidopsis Sequence Match ( AT5G57560.1 )
(BLAST)

001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA

Arabidopsis Description

XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.