Factsheet for GSMUA_Achr6P19100_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	88.89	89.89
KRH22496	Soybean	extracellular	66.3	61.72
KRH26853	Soybean	vacuole	66.3	60.47
VIT_12s0134g00160.t01	Wine grape	extracellular	65.93	60.14
KRH25426	Soybean	extracellular	65.19	59.06
KRH56088	Soybean	vacuole	64.44	58.59
Solyc07g052980.2.1	Tomato	extracellular	64.07	58.45
PGSC0003DMT400067358	Potato	extracellular	64.07	58.45
AT4G03210.1	Thale cress	extracellular	62.22	57.93
CDY21985	Canola	extracellular	61.11	56.9
CDY22110	Canola	extracellular	61.11	56.9
CDY53771	Canola	extracellular	61.11	56.9
Bra000840.1-P	Field mustard	extracellular	60.74	56.55
CDX90896	Canola	extracellular	60.74	56.55
EER91282	Sorghum	extracellular, vacuole	67.41	56.52
EES11493	Sorghum	extracellular, vacuole	67.41	56.0
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	39.63	55.44
GSMUA_Achr5P19320_001	Banana	vacuole	58.15	55.28
Zm00001d002193_P003	Maize	extracellular, vacuole	68.15	54.6
GSMUA_Achr9P13820_001	Banana	cytosol	40.74	52.63
GSMUA_Achr3P05220_001	Banana	cytosol	40.37	52.4
GSMUA_Achr10P...	Banana	cytosol	38.52	52.26
GSMUA_Achr7P16430_001	Banana	cytosol	40.0	50.7
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	39.26	50.24
GSMUA_Achr5P21880_001	Banana	cytosol	39.26	49.77
GSMUA_Achr8P34300_001	Banana	cytosol	49.26	48.54
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	35.19	48.22
Bra034193.1-P	Field mustard	cytosol	60.0	47.09
GSMUA_Achr10P...	Banana	extracellular	48.89	46.81
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	48.52	46.62
GSMUA_Achr6P30850_001	Banana	extracellular	47.41	45.39
GSMUA_Achr3P26220_001	Banana	extracellular	47.78	45.1
GSMUA_Achr10P...	Banana	extracellular	47.78	44.79
GSMUA_Achr8P05120_001	Banana	extracellular	47.41	44.76
GSMUA_Achr8P26470_001	Banana	extracellular	47.04	44.41
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	48.15	44.07
GSMUA_Achr3P03390_001	Banana	extracellular	46.3	42.52
GSMUA_Achr7P10940_001	Banana	extracellular	43.7	42.45
GSMUA_Achr1P08500_001	Banana	extracellular	42.59	42.44
GSMUA_Achr8P19740_001	Banana	extracellular	41.48	41.64
GSMUA_Achr1P14290_001	Banana	vacuole	44.81	40.88
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	44.44	27.15

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr6G19100_001	EnsemblPlants:GSMUA_Achr6P19100_001	EnsemblPlants:GSMUA_Achr6T19100_001
InterPro:IPR000757	UniProt:M0T8A8	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF11	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI000296F311
InterPro:XET_C	InterPro:XTH	:	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr6G19100_001]

Coordinates

chr6:+:13389973..13391060

Molecular Weight (calculated)

30420.5 Da

IEP (calculated)

4.865

GRAVY (calculated)

-0.348

Length

270 amino acids

Sequence
(BLAST)

001: MESSNGGGWR MVMVLYVAVS MVGSGWCSKF DELVQPSWAT DHVIYEGELL KLKLDNSSGA GFVSKSKYLY GKVTAELKLV EGDSAGTVTA FYMSSDWVNH
101: NEFDFEFLGN RTGEPYLVQT NLYINGVGDR EQRMDLWFDP TADFHAYSIL WNPRQVVFLV DDTPIRVFSN HENRGVAFPR DQPMGVYSSI WNADDWATEG
201: GRVKTDWSHA PFVATFRGLR IDGCEWAPEA GAPADVHQSH QLIWARANHL VYDYCNDPGR FATHPPECGK

Best Arabidopsis Sequence Match ( AT4G03210.1 )
(BLAST)

001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL

Arabidopsis Description

XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.