Factsheet for Bra000840.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 7
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90896	Canola	extracellular	98.97	98.97
AT4G03210.1	Thale cress	extracellular	91.38	91.38
Bra034193.1-P	Field mustard	cytosol	92.76	78.2
KRH22496	Soybean	extracellular	71.72	71.72
KRH26853	Soybean	vacuole	71.38	69.93
KRH25426	Soybean	extracellular	69.31	67.45
VIT_12s0134g00160.t01	Wine grape	extracellular	68.62	67.23
KRH56088	Soybean	vacuole	68.28	66.67
Solyc07g052980.2.1	Tomato	extracellular	67.93	66.55
PGSC0003DMT400067358	Potato	extracellular	66.9	65.54
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	57.24	62.17
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	56.55	60.74
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	48.28	50.18
EER91282	Sorghum	extracellular, vacuole	55.17	49.69
EES11493	Sorghum	extracellular, vacuole	55.17	49.23
Bra024415.1-P	Field mustard	extracellular	47.59	48.42
Bra011179.1-P	Field mustard	extracellular	46.9	48.23
Bra006220.1-P	Field mustard	vacuole	48.62	48.12
Zm00001d002193_P003	Maize	extracellular, vacuole	55.52	47.77
Bra013164.1-P	Field mustard	extracellular	48.28	47.46
Bra024089.1-P	Field mustard	extracellular	45.17	46.95
Bra017855.1-P	Field mustard	extracellular, vacuole	47.24	46.92
Bra014975.1-P	Field mustard	extracellular, vacuole	46.9	46.74
Bra013922.1-P	Field mustard	extracellular	46.21	46.69
Bra008806.1-P	Field mustard	extracellular	46.21	46.69
Bra038442.1-P	Field mustard	extracellular	46.21	46.37
Bra020434.1-P	Field mustard	extracellular	45.52	46.32
Bra002722.1-P	Field mustard	extracellular	44.83	45.77
Bra002719.1-P	Field mustard	extracellular	44.14	45.23
Bra019846.1-P	Field mustard	extracellular	45.86	44.48
Bra020436.1-P	Field mustard	extracellular	42.76	43.82
Bra020432.1-P	Field mustard	extracellular	42.41	43.46
Bra013923.1-P	Field mustard	extracellular	42.41	43.31
Bra040716.1-P	Field mustard	vacuole	44.14	43.1
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	35.52	43.1
Bra002723.1-P	Field mustard	extracellular	42.41	43.01
Bra020433.1-P	Field mustard	extracellular	37.93	42.31
Bra019141.1-P	Field mustard	extracellular	41.38	41.96
Bra011066.1-P	Field mustard	extracellular	41.03	40.75
Bra006814.1-P	Field mustard	extracellular	42.07	38.24

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	EnsemblPlantsGene:Bra000840	EnsemblPlants:Bra000840.1	EnsemblPlants:Bra000840.1-P
InterPro:ConA-like_dom_sf	InterPro:GH16	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	UniProt:M4C9G1	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF11	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0002540532
InterPro:XET_C	InterPro:XTH	SEG:seg	:	:	:

Description

AT4G03210 (E=4e-157) XTH9 | XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase

Coordinates

chrA03:-:13435912..13437043

Molecular Weight (calculated)

33120.0 Da

IEP (calculated)

5.023

GRAVY (calculated)

-0.332

Length

290 amino acids

Sequence
(BLAST)

001: MVGMSWFMCM MMMVCVISCG EAAPGAKFED LYRSSWAMDH CVNDGEVTKL KLDNSSGAGF ESRSKYLFGK VSIQIKLVEG DSAGTVTAFY MSSEGSNHNE
101: FDFEFLGNTT GEPYIVQTNV YVNGVGNREQ RLNLWFDPTT EFHTYSILWS KRSVVFMVDE TPIRVHKNLE DKGIPFAKDQ AMGVYSSIWN ADDWATQGGL
201: VKTDWSHAPF IASYKDFKID ACEVPTTTDL SKCNGEDQRF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CYDAARFPVT PLECQHHRHL

Best Arabidopsis Sequence Match ( AT4G03210.1 )
(BLAST)

001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL

Arabidopsis Description

XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.