Factsheet for Bra002719.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25903	Canola	extracellular	89.05	96.92
Bra020433.1-P	Field mustard	extracellular	86.22	93.85
AT5G57560.1	Thale cress	extracellular	92.23	91.9
Bra008806.1-P	Field mustard	extracellular	85.51	84.32
Bra013922.1-P	Field mustard	extracellular	85.51	84.32
Bra024089.1-P	Field mustard	extracellular	72.44	73.48
Bra011179.1-P	Field mustard	extracellular	73.14	73.4
KRH19136	Soybean	nucleus	72.08	72.08
VIT_11s0052g01220.t01	Wine grape	extracellular	71.38	70.88
KRH37378	Soybean	nucleus	64.31	68.42
PGSC0003DMT400036329	Potato	extracellular	66.43	66.67
Bra002722.1-P	Field mustard	extracellular	65.72	65.49
Bra020434.1-P	Field mustard	extracellular	65.72	65.26
VIT_11s0052g01250.t01	Wine grape	extracellular	66.43	65.05
Solyc05g046290.2.1	Tomato	extracellular	66.08	64.93
Solyc07g009380.2.1	Tomato	extracellular, nucleus	62.54	64.36
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	51.94	61.51
Bra013923.1-P	Field mustard	extracellular	60.07	59.86
Bra020432.1-P	Field mustard	extracellular	59.72	59.72
Bra038442.1-P	Field mustard	extracellular	60.42	59.17
Bra020436.1-P	Field mustard	extracellular	59.01	59.01
Bra002723.1-P	Field mustard	extracellular	59.36	58.74
Bra014975.1-P	Field mustard	extracellular, vacuole	59.36	57.73
KRH12375	Soybean	extracellular	64.31	57.59
Bra019141.1-P	Field mustard	extracellular	57.95	57.34
Bra006814.1-P	Field mustard	extracellular	59.36	52.66
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	49.47	50.18
Bra006220.1-P	Field mustard	vacuole	49.47	47.78
Bra024415.1-P	Field mustard	extracellular	46.29	45.96
Bra013164.1-P	Field mustard	extracellular	47.35	45.42
Bra011066.1-P	Field mustard	extracellular	46.64	45.21
Bra017855.1-P	Field mustard	extracellular, vacuole	46.29	44.86
Bra000840.1-P	Field mustard	extracellular	45.23	44.14
Bra019846.1-P	Field mustard	extracellular	43.11	40.8
Bra040716.1-P	Field mustard	vacuole	42.4	40.4
Bra034193.1-P	Field mustard	cytosol	45.23	37.21

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	EnsemblPlantsGene:Bra002719	EnsemblPlants:Bra002719.1	EnsemblPlants:Bra002719.1-P
InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005975	GO:GO:0006073	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009408	GO:GO:0009409	GO:GO:0009605	GO:GO:0009612	GO:GO:0009628	GO:GO:0009719
GO:GO:0009733	GO:GO:0009741	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	UniProt:M4CET7	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899
SignalP:SignalP-noTM	UniParc:UPI0002544F94	InterPro:XET_C	InterPro:XTH	SEG:seg	:

Description

AT5G57560 (E=3e-150) TCH4, XTH22 | TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase

Coordinates

chrA10:-:8013643..8014572

Molecular Weight (calculated)

31983.6 Da

IEP (calculated)

6.274

GRAVY (calculated)

-0.487

Length

283 amino acids

Sequence
(BLAST)

001: MAHSYFLPLF ISLIVISSVS ANFQRDVEIT WGDGRGQITN NGELLTLSLD KSSGSGFQSK NEYLFGKIDM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNLSGDP YTLHTNVYTQ GKGDKEQQFK LWFDPTADFH TYTILWNPQR IIFTVDGTPI REFKNMESVG TLFPKNQPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFNQEACV WSNGKSSCPN GSGQGPTGSW LSQELDSTAQ ERMRWVQKNY MIYNYCTDTK RFPQGLPKEC FAA

Best Arabidopsis Sequence Match ( AT5G57560.1 )
(BLAST)

001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA

Arabidopsis Description

XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.