Factsheet for Bra013922.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
extracellular 7
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89393	Canola	extracellular	100.0	100.0
Bra008806.1-P	Field mustard	extracellular	98.95	98.95
AT4G25810.1	Thale cress	extracellular	91.99	92.31
Bra002719.1-P	Field mustard	extracellular	84.32	85.51
Bra020433.1-P	Field mustard	extracellular	75.26	83.08
KRH19136	Soybean	nucleus	72.13	73.14
Bra024089.1-P	Field mustard	extracellular	70.38	72.4
VIT_11s0052g01220.t01	Wine grape	extracellular	71.78	72.28
Bra011179.1-P	Field mustard	extracellular	70.38	71.63
KRH37378	Soybean	nucleus	65.85	71.05
PGSC0003DMT400036329	Potato	extracellular	67.25	68.44
VIT_11s0052g01250.t01	Wine grape	extracellular	67.25	66.78
Solyc05g046290.2.1	Tomato	extracellular	66.55	66.32
Bra020434.1-P	Field mustard	extracellular	65.16	65.61
Solyc07g009380.2.1	Tomato	extracellular, nucleus	62.72	65.45
Bra002722.1-P	Field mustard	extracellular	63.76	64.44
Bra038442.1-P	Field mustard	extracellular	61.67	61.25
Bra002723.1-P	Field mustard	extracellular	60.28	60.49
KRH12375	Soybean	extracellular	66.55	60.44
Bra020432.1-P	Field mustard	extracellular	59.58	60.42
Bra020436.1-P	Field mustard	extracellular	59.58	60.42
Bra013923.1-P	Field mustard	extracellular	59.58	60.21
Bra014975.1-P	Field mustard	extracellular, vacuole	60.63	59.79
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	49.13	59.0
Bra019141.1-P	Field mustard	extracellular	57.14	57.34
Bra006814.1-P	Field mustard	extracellular	58.88	52.98
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	50.17	51.61
Bra006220.1-P	Field mustard	vacuole	50.52	49.49
Bra024415.1-P	Field mustard	extracellular	47.04	47.37
Bra013164.1-P	Field mustard	extracellular	48.43	47.12
Bra017855.1-P	Field mustard	extracellular, vacuole	47.04	46.23
Bra000840.1-P	Field mustard	extracellular	46.69	46.21
Bra011066.1-P	Field mustard	extracellular	46.69	45.89
Bra019846.1-P	Field mustard	extracellular	43.9	42.14
Bra040716.1-P	Field mustard	vacuole	41.81	40.4
Bra034193.1-P	Field mustard	cytosol	45.99	38.37

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EnsemblPlantsGene:Bra013922	EnsemblPlants:Bra013922.1	EnsemblPlants:Bra013922.1-P	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	UniProt:M4DBR2	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0002546A19
InterPro:XET_C	InterPro:XTH	SEG:seg	:	:	:

Description

AT4G25810 (E=4e-147) XTR6, XTH23 | XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase

Coordinates

chrA01:+:8457483..8458967

Molecular Weight (calculated)

32114.5 Da

IEP (calculated)

5.109

GRAVY (calculated)

-0.431

Length

287 amino acids

Sequence
(BLAST)

001: MAMINYSTIL SPLLAAIMIY SVSANFHQDV EITWGDGRGQ ITNNGDLLTL SLDKSSGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSSGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTI DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEDWATRGGL
201: VKTDWSKAPF TASYRGFSEE ACVVSNGKSS CSNGSGQGSS SGSWLSQELD STGQERMRWV QSNYMIYNYC TDAKRFPQGL PRECLSA

Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)

001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA

Arabidopsis Description

XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.