Factsheet for Bra020432.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59998	Canola	extracellular	99.65	99.65
VIT_11s0052g01230.t01	Wine grape	cytosol	60.42	61.51
Bra002719.1-P	Field mustard	extracellular	59.72	59.72
Bra008806.1-P	Field mustard	extracellular	60.42	59.58
Bra013922.1-P	Field mustard	extracellular	60.42	59.58
Bra011179.1-P	Field mustard	extracellular	58.3	58.51
Bra024089.1-P	Field mustard	extracellular	57.24	58.06
Bra002722.1-P	Field mustard	extracellular	57.24	57.04
Bra020433.1-P	Field mustard	extracellular	52.3	56.92
Bra020434.1-P	Field mustard	extracellular	56.89	56.49
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	47.7	56.49
Bra002723.1-P	Field mustard	extracellular	55.48	54.9
Bra020436.1-P	Field mustard	extracellular	54.77	54.77
Bra013923.1-P	Field mustard	extracellular	54.42	54.23
Bra019141.1-P	Field mustard	extracellular	54.77	54.2
Bra038442.1-P	Field mustard	extracellular	52.65	51.56
Bra014975.1-P	Field mustard	extracellular, vacuole	52.65	51.2
Bra006814.1-P	Field mustard	extracellular	54.42	48.28
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	45.94	46.59
Bra024415.1-P	Field mustard	extracellular	46.64	46.32
Bra006220.1-P	Field mustard	vacuole	46.64	45.05
Bra017855.1-P	Field mustard	extracellular, vacuole	45.58	44.18
Bra011066.1-P	Field mustard	extracellular	45.58	44.18
Bra013164.1-P	Field mustard	extracellular	44.88	43.05
Bra000840.1-P	Field mustard	extracellular	43.46	42.41
Bra040716.1-P	Field mustard	vacuole	44.17	42.09
Bra019846.1-P	Field mustard	extracellular	42.76	40.47
Bra034193.1-P	Field mustard	cytosol	43.11	35.47

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EnsemblPlantsGene:Bra020432	EnsemblPlants:Bra020432.1	EnsemblPlants:Bra020432.1-P	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	UniProt:M4DV88	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0002545EE7
InterPro:XET_C	InterPro:XTH	:	:	:	:

Description

AT5G57560 (E=6e-104) TCH4, XTH22 | TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase

Coordinates

chrA02:-:6731874..6732901

Molecular Weight (calculated)

31793.6 Da

IEP (calculated)

6.755

GRAVY (calculated)

-0.297

Length

283 amino acids

Sequence
(BLAST)

001: MGCSPILISL FILSCSALIL AGDFRKDIDI VWGSDKAKIL ENGQAITLSL DKASGSGFES KAQFLFGKVS MELKLVPGNS AGTVTSYYLA SKGTMWDEID
101: FEFLGNLSGD PYTVHTNVIT QGKGDREQQF RLWFDPTVDF HTYSILWNPK TIVFYVDGTP IREFKKMNTK NVAYPEKQAM RVHSSLWNGD DWATRGGLVK
201: TDWSKAPFTA YYRNFEVQDC DWSAPGSNVS CGGGGPNSWL NEGIDENSRK RLKWVQSNFI IYNYCNDAKR FRLGLPTECV VMN

Best Arabidopsis Sequence Match ( AT2G18800.1 )
(BLAST)

001: MVSSTLLVMS ISLFLGLSIL LVVHGKDFNQ DIDITWGDGR GNILNNGTLL NLGLDQSSGS GFQSKAEYLY GKVDMQIKLV PGNSAGTVTT FYLKSQGLTW
101: DEIDFEFLGN VSGDPYIVHT NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK NQPMRMYGSL WNADDWATRG
201: GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN
301: KNTKS

Arabidopsis Description

XTH21Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VQ29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.