Factsheet for Bra013923.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69806	Canola	extracellular	100.0	100.0
Bra019141.1-P	Field mustard	extracellular	88.03	87.41
AT4G25820.1	Thale cress	extracellular	84.51	83.62
Bra002723.1-P	Field mustard	extracellular	79.93	79.37
Bra020436.1-P	Field mustard	extracellular	78.87	79.15
Bra006814.1-P	Field mustard	extracellular	79.23	70.53
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	46.13	67.88
GSMUA_Achr10P...	Banana	cytosol	46.83	66.83
GSMUA_Achr3P05220_001	Banana	cytosol	47.54	64.9
GSMUA_Achr5P21880_001	Banana	cytosol	47.18	62.91
GSMUA_Achr9P13820_001	Banana	cytosol	46.13	62.68
GSMUA_Achr7P16430_001	Banana	cytosol	46.48	61.97
Bra020434.1-P	Field mustard	extracellular	61.97	61.75
Os06t0697000-02	Rice	extracellular	61.97	60.69
Bra002719.1-P	Field mustard	extracellular	59.86	60.07
HORVU7Hr1G098320.3	Barley	vacuole	60.92	59.86
TraesCS7A01G426900.1	Wheat	extracellular	60.21	59.79
TraesCS7B01G327000.1	Wheat	extracellular	61.27	59.59
Bra008806.1-P	Field mustard	extracellular	60.21	59.58
Bra013922.1-P	Field mustard	extracellular	60.21	59.58
Bra002722.1-P	Field mustard	extracellular	59.51	59.51
TraesCS7A01G427000.1	Wheat	extracellular	59.86	59.44
TraesCS7B01G327200.1	Wheat	extracellular	59.86	59.44
TraesCS7D01G419300.1	Wheat	extracellular	60.56	59.31
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	60.92	59.25
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	46.48	59.19
TraesCS7B01G326900.1	Wheat	extracellular	60.21	59.17
TraesCS7D01G419100.1	Wheat	extracellular	59.86	59.03
TraesCS7A01G426100.1	Wheat	vacuole	59.86	58.82
TraesCS7A01G426700.1	Wheat	extracellular	59.51	58.48
TraesCS7D01G419200.1	Wheat	extracellular	58.8	58.39
TraesCS7A01G426600.1	Wheat	vacuole	59.51	58.28
HORVU7Hr1G098260.1	Barley	vacuole	59.86	58.22
Bra020433.1-P	Field mustard	extracellular	53.17	58.08
EER90303	Sorghum	extracellular, golgi, vacuole	61.27	57.81
Solyc07g006870.2.1	Tomato	extracellular, vacuole	57.04	57.45
Bra011179.1-P	Field mustard	extracellular	57.04	57.45
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	39.79	57.36
Bra038442.1-P	Field mustard	extracellular	58.1	57.09
Zm00001d014617_P001	Maize	extracellular	59.86	57.05
PGSC0003DMT400048242	Potato	extracellular	55.99	56.99
Bra014975.1-P	Field mustard	extracellular, vacuole	57.75	56.36
Bra024089.1-P	Field mustard	extracellular	55.28	56.27
EER88885	Sorghum	extracellular	57.75	56.16
TraesCS7D01G419900.1	Wheat	extracellular	56.69	56.1
HORVU7Hr1G098440.2	Barley	extracellular	56.34	55.94
TraesCS7B01G327700.1	Wheat	extracellular	57.04	55.86
Os06t0696400-01	Rice	extracellular	57.39	55.63
TraesCS7A01G427600.1	Wheat	extracellular	56.34	55.36
Bra020432.1-P	Field mustard	extracellular	54.23	54.42
Zm00001d014613_P001	Maize	plasma membrane	55.28	54.14
TraesCS7D01G418600.1	Wheat	vacuole	59.86	53.29
Zm00001d009309_P001	Maize	extracellular, vacuole	51.41	52.71
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	42.61	50.63
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	46.48	47.31
Bra011066.1-P	Field mustard	extracellular	47.54	46.23
Bra013164.1-P	Field mustard	extracellular	46.83	45.08
Bra006220.1-P	Field mustard	vacuole	46.48	45.05
Bra017855.1-P	Field mustard	extracellular, vacuole	45.77	44.52
Bra024415.1-P	Field mustard	extracellular	44.37	44.21
Bra040716.1-P	Field mustard	vacuole	44.72	42.76
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	60.21	42.75
Bra000840.1-P	Field mustard	extracellular	43.31	42.41
Bra019846.1-P	Field mustard	extracellular	43.31	41.14
Bra034193.1-P	Field mustard	cytosol	43.31	35.76

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	EnsemblPlantsGene:Bra013923	EnsemblPlants:Bra013923.1	EnsemblPlants:Bra013923.1-P
InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	UniProt:M4DBR3	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002546A1A	InterPro:XET_C	InterPro:XTH	SEG:seg

Description

AT4G25820 (E=9e-140) XTR9 | XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase

Coordinates

chrA01:+:8464205..8465722

Molecular Weight (calculated)

32200.8 Da

IEP (calculated)

6.353

GRAVY (calculated)

-0.333

Length

284 amino acids

Sequence
(BLAST)

001: MAVSATKKPL LLLSLFFFVV AASAGNFYES FDITWGDGRA KILEDGQLLT CTLDKISGSG FQSKKEYLYG KIDMKLKLVA GNSAGTVTAY YLSSKGATWD
101: EIDFEFLGNL TGQPYTIHTN VFTGGKGDRE MQFHLWFDPT ADFHTYTVHW NPVNIIFLVD GIPIRVFKNN EKNGVGYPTS QPMKIYSSLW EADDWATQGG
201: RVKIDWSNAP FSASYRSFND QSACSRTSNA TWVACDANKD SWMWTSLNNH QYGQMKWVQD EFMIYNYCTD YKRFPQGLAK ECNL

Best Arabidopsis Sequence Match ( AT4G25820.1 )
(BLAST)

001: MACFATKQPL LLSLLLAIGF FVVAASAGNF YESFDITWGN GRANIFENGQ LLTCTLDKVS GSGFQSKKEY LFGKIDMKLK LVAGNSAGTV TAYYLSSKGT
101: AWDEIDFEFL GNRTGHPYTI HTNVFTGGKG DREMQFRLWF DPTADFHTYT VHWNPVNIIF LVDGIPIRVF KNNEKNGVAY PKNQPMRIYS SLWEADDWAT
201: EGGRVKIDWS NAPFKASYRN FNDQSSCSRT SSSKWVTCEP NSNSWMWTTL NPAQYGKMMW VQRDFMIYNY CTDFKRFPQG LPKECKL

Arabidopsis Description

XTH14Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UTG4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.