Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G098440.2 | Barley | extracellular | 96.54 | 97.55 |
| TraesCS7B01G327700.1 | Wheat | extracellular | 97.23 | 96.9 |
| TraesCS7D01G419900.1 | Wheat | extracellular | 96.19 | 96.86 |
| Os06t0696400-01 | Rice | extracellular | 87.2 | 86.01 |
| EER88885 | Sorghum | extracellular | 83.39 | 82.53 |
| Zm00001d009309_P001 | Maize | extracellular, vacuole | 77.16 | 80.51 |
| Zm00001d014613_P001 | Maize | plasma membrane | 77.16 | 76.9 |
| GSMUA_Achr9P13820_001 | Banana | cytosol | 53.29 | 73.68 |
| GSMUA_Achr4P02240_001 | Banana | cytosol, mitochondrion, nucleus | 48.79 | 73.06 |
| GSMUA_Achr3P05220_001 | Banana | cytosol | 52.25 | 72.6 |
| GSMUA_Achr7P16430_001 | Banana | cytosol | 52.25 | 70.89 |
| GSMUA_Achr10P... | Banana | cytosol | 48.1 | 69.85 |
| GSMUA_Achr5P21880_001 | Banana | cytosol | 51.21 | 69.48 |
| TraesCS7A01G427000.1 | Wheat | extracellular | 68.17 | 68.88 |
| TraesCS7A01G426900.1 | Wheat | extracellular | 67.82 | 68.53 |
| TraesCS7A01G426100.1 | Wheat | vacuole | 68.51 | 68.51 |
| TraesCS7A01G426700.1 | Wheat | extracellular | 68.17 | 68.17 |
| TraesCS7A01G426600.1 | Wheat | vacuole | 67.47 | 67.24 |
| GSMUA_Achr3P05200_001 | Banana | cytosol, plastid, vacuole | 44.29 | 64.97 |
| Bra020434.1-P | Field mustard | extracellular | 58.82 | 59.65 |
| AT5G57550.1 | Thale cress | extracellular | 58.48 | 59.51 |
| CDY25904 | Canola | extracellular | 57.79 | 58.8 |
| CDY67778 | Canola | extracellular | 57.44 | 58.45 |
| Bra002722.1-P | Field mustard | extracellular | 57.44 | 58.45 |
| VIT_11s0052g01230.t01 | Wine grape | cytosol | 56.06 | 58.27 |
| Solyc07g006870.2.1 | Tomato | extracellular, vacuole | 56.75 | 58.16 |
| CDY02738 | Canola | extracellular, nucleus, vacuole | 43.25 | 58.14 |
| PGSC0003DMT400048242 | Potato | extracellular | 56.06 | 58.06 |
| TraesCS7A01G427100.1 | Wheat | extracellular | 57.09 | 57.89 |
| TraesCS7A01G427300.1 | Wheat | extracellular | 56.75 | 57.54 |
| AT4G25820.1 | Thale cress | extracellular | 57.09 | 57.49 |
| CDY11863 | Canola | extracellular | 56.4 | 56.99 |
| AT5G57530.1 | Thale cress | extracellular | 56.06 | 56.84 |
| AT5G57540.1 | Thale cress | extracellular | 55.71 | 56.69 |
| CDY67488 | Canola | extracellular | 55.36 | 56.54 |
| Bra020436.1-P | Field mustard | extracellular | 55.36 | 56.54 |
| CDY69806 | Canola | extracellular | 55.36 | 56.34 |
| Bra013923.1-P | Field mustard | extracellular | 55.36 | 56.34 |
| CDY67779 | Canola | extracellular | 55.71 | 56.29 |
| Bra002723.1-P | Field mustard | extracellular | 55.71 | 56.29 |
| CDX88627 | Canola | extracellular | 55.71 | 56.29 |
| CDX92733 | Canola | extracellular | 54.67 | 55.24 |
| CDY50186 | Canola | extracellular | 54.33 | 54.9 |
| Bra019141.1-P | Field mustard | extracellular | 54.33 | 54.9 |
| TraesCS4A01G172600.1 | Wheat | unclear | 53.29 | 52.38 |
| Bra006814.1-P | Field mustard | extracellular | 55.02 | 49.84 |
| TraesCS2A01G433800.1 | Wheat | endoplasmic reticulum, extracellular | 48.1 | 49.64 |
| TraesCS2A01G434300.1 | Wheat | extracellular | 51.21 | 48.84 |
| PGSC0003DMT400048240 | Potato | golgi | 57.44 | 48.54 |
| Solyc07g006850.1.1 | Tomato | golgi | 56.75 | 47.95 |
| TraesCS7A01G427200.1 | Wheat | extracellular, vacuole | 48.44 | 47.46 |
| TraesCS2A01G089000.1 | Wheat | extracellular | 46.02 | 46.83 |
| TraesCS6A01G337600.1 | Wheat | extracellular | 47.75 | 46.78 |
| TraesCS7A01G463800.1 | Wheat | extracellular | 45.67 | 46.32 |
| TraesCS2A01G433600.1 | Wheat | vacuole | 47.06 | 45.95 |
| TraesCS2A01G047200.1 | Wheat | vacuole | 46.02 | 45.86 |
| TraesCS2A01G047100.1 | Wheat | endoplasmic reticulum, extracellular | 46.02 | 45.7 |
| TraesCS7A01G331200.1 | Wheat | vacuole | 44.98 | 45.61 |
| TraesCS2A01G433700.1 | Wheat | vacuole | 45.67 | 44.59 |
| TraesCS2A01G498200.1 | Wheat | extracellular | 43.6 | 43.6 |
| TraesCS2A01G498400.1 | Wheat | vacuole | 43.25 | 43.25 |
| TraesCS2A01G498300.1 | Wheat | vacuole | 43.25 | 43.25 |
| TraesCS2A01G498500.1 | Wheat | vacuole | 43.25 | 42.81 |
| TraesCS2A01G433500.1 | Wheat | mitochondrion | 48.44 | 41.79 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 |
| InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 |
| PANTHER:PTHR31062 | PANTHER:PTHR31062:SF42 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS7A01G427600 | EnsemblPlants:TraesCS7A01G427600.1 |
| InterPro:XET_C | InterPro:XTH | TIGR:cd02176 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7A:-:620749363..620750448
Molecular Weight (calculated)
31890.7 Da
IEP (calculated)
8.932
GRAVY (calculated)
-0.354
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAAALGIVA MACLVAVARG GNFIQDSEMT WGDGRGKVVD GGRGLDLTLD KTSGSGFQSK SEYLFGKIDM QIKLVPGNSA GTVTTFYLSS QGTAHDEIDF
101: EFLGNVTGEP YTLHTNVFAQ GQGQREQQFR LWFDPTKAFH TYSIIWNPQH VIFAVDGTAI RDFKNHEARG VSFPKSQPMR LYASLWNADD WATQGGRVKT
201: DWSKAPFVAS FRNFNADACV MSGGAQRCPA GTMEASAAGA NGSGSWWNQE LSGMGYRRMR WVQRKFMIYN YCTDPKRVAQ GVPAECKLR
101: EFLGNVTGEP YTLHTNVFAQ GQGQREQQFR LWFDPTKAFH TYSIIWNPQH VIFAVDGTAI RDFKNHEARG VSFPKSQPMR LYASLWNADD WATQGGRVKT
201: DWSKAPFVAS FRNFNADACV MSGGAQRCPA GTMEASAAGA NGSGSWWNQE LSGMGYRRMR WVQRKFMIYN YCTDPKRVAQ GVPAECKLR
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.