Factsheet for TraesCS2A01G433800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	97.14	97.14
TraesCS2B01G454800.1	Wheat	extracellular	95.36	95.36
Os04t0604300-01	Rice	extracellular	72.5	72.5
Zm00001d002410_P001	Maize	extracellular	71.07	71.84
Zm00001d026250_P001	Maize	extracellular, vacuole	70.0	71.79
EES12802	Sorghum	endoplasmic reticulum, extracellular	71.79	70.77
TraesCS7A01G427100.1	Wheat	extracellular	53.57	52.63
TraesCS7A01G426900.1	Wheat	extracellular	53.57	52.45
TraesCS7A01G427300.1	Wheat	extracellular	53.21	52.28
TraesCS7A01G427000.1	Wheat	extracellular	52.5	51.4
TraesCS7A01G426700.1	Wheat	extracellular	52.86	51.21
TraesCS7A01G426600.1	Wheat	vacuole	52.86	51.03
TraesCS7A01G426100.1	Wheat	vacuole	52.5	50.87
TraesCS2A01G434300.1	Wheat	extracellular	52.5	48.51
TraesCS7A01G463800.1	Wheat	extracellular	49.29	48.42
TraesCS7A01G427600.1	Wheat	extracellular	49.64	48.1
TraesCS2A01G433600.1	Wheat	vacuole	50.36	47.64
TraesCS6A01G337600.1	Wheat	extracellular	49.64	47.12
TraesCS2A01G433700.1	Wheat	vacuole	48.93	46.28
TraesCS2A01G047200.1	Wheat	vacuole	47.86	46.21
TraesCS2A01G047100.1	Wheat	endoplasmic reticulum, extracellular	47.14	45.36
TraesCS7A01G427200.1	Wheat	extracellular, vacuole	45.36	43.05
TraesCS2A01G498400.1	Wheat	vacuole	42.5	41.18
TraesCS2A01G498300.1	Wheat	vacuole	42.5	41.18
TraesCS2A01G498200.1	Wheat	extracellular	42.5	41.18
TraesCS7A01G331200.1	Wheat	vacuole	41.79	41.05
TraesCS4A01G172600.1	Wheat	unclear	42.86	40.82
TraesCS2A01G089000.1	Wheat	extracellular	40.71	40.14
TraesCS2A01G498500.1	Wheat	vacuole	41.07	39.38
TraesCS2A01G433500.1	Wheat	mitochondrion	41.79	34.93

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF94	SUPFAM:SSF49899	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS2A01G433800	EnsemblPlants:TraesCS2A01G433800.1	InterPro:XET_C	InterPro:XTH	TIGR:cd02176	SEG:seg

Description

No Description!

Coordinates

chr2A:+:686797160..686798213

Molecular Weight (calculated)

31107.2 Da

IEP (calculated)

6.020

GRAVY (calculated)

-0.326

Length

280 amino acids

Sequence
(BLAST)

001: MAVSSKQAYA CVVLVVLCIA ARTAAAWGRI DDRLEVNWGH GSHGTVSADG QVISLSLDRN SGSGFRSRDT YLYARIDLQI KLAPGNSAGT VTTCYFLSEG
101: SWANHDEIDL EFLGNSTGEP YTLHTNVYIN GTGSKEQQFH LWFDPAADFH TYSIVWTPLH ILVLVDGTPI RELRNHADKG VAYPSWQRMR LYGSLWNAED
201: WATQGGRVKT DWSLAPFVAQ YRNFTATTSS PGAGGGYYDQ EMDATAQQAM KWARDTHMVY NYCADSARFP YGSPPECYMP

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.