Factsheet for Os04t0604300-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

extracellular: 19226311

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12802	Sorghum	endoplasmic reticulum, extracellular	79.29	78.17
Zm00001d026250_P001	Maize	extracellular, vacuole	76.07	78.02
Zm00001d002410_P001	Maize	extracellular	77.14	77.98
TraesCS2B01G454800.1	Wheat	extracellular	73.21	73.21
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	72.86	72.86
TraesCS2A01G433800.1	Wheat	endoplasmic reticulum, extracellular	72.5	72.5
Os04t0604200-01	Rice	extracellular	53.93	51.54
Os08t0237800-00	Rice	extracellular, vacuole	53.93	49.84
Os06t0697000-02	Rice	extracellular	50.71	48.97
Os06t0696600-01	Rice	extracellular	49.64	48.26
Os06t0696400-01	Rice	extracellular	50.36	48.12
Os04t0604800-00	Rice	extracellular	49.64	47.28
Os08t0240566-00	Rice	cytosol, extracellular, mitochondrion, plastid	52.86	46.4
Os04t0604900-01	Rice	extracellular, vacuole	49.29	42.99
Os08t0240500-00	Rice	extracellular	34.64	42.36
Os11t0539200-01	Rice	extracellular	41.07	38.98
Os06t0696566-01	Rice	cytosol, extracellular, mitochondrion	11.79	37.93

Protein Annotations

Gene3D:2.60.120.200	EntrezGene:4336904	MapMan:50.2.4	EMBL:AK070734	ProteinID:BAF15701.1	ProteinID:BAS90874.1
InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	EnsemblPlantsGene:Os04g0604300	EnsemblPlants:Os04t0604300-01	PFAM:PF00722	PFAM:PF06955
PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF94	UniProt:Q0JAD6
SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0000DD9260	InterPro:XET_C	RefSeq:XP_015634499.1	InterPro:XTH
SEG:seg	:	:	:	:	:

Description

XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 9Similar to Xyloglucan endotransglucosylase/hydrolase protein 24 precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase). (Os04t0604300-01)

Coordinates

chr4:-:30482211..30483492

Molecular Weight (calculated)

30997.3 Da

IEP (calculated)

5.090

GRAVY (calculated)

-0.360

Length

280 amino acids

Sequence
(BLAST)

001: MGFGSREMAC ALVALVLGLC CVGGARATGR IDEGLEVMWG DGRGSVSPDG QVMALSLDHT SGSGWRSKNT YLFARVDLQI KLVANNSAGT VTTCYFMSEG
101: EWDIHDEVDL EFLGNVTGQP YTLHTNVFAN GTGGKEQQFH LWFDPTTDFH TYSIVWTSQH ILVLVDGTPI REMKNHADKG IAYPSSQRMR LYGSLWNADD
201: WATQGGRVKT DWSQAPFVAR YRNFTATEAA SSSSPAGYDQ QMDATAQQAM KWARDNYMVY DYCADSKRFP QGFPPECSMP

Best Arabidopsis Sequence Match ( AT4G30270.1 )
(BLAST)

001: MSPFKIFFFT TLLVAAFSVS AADFNTDVNV AWGNGRGKIL NNGQLLTLSL DKSSGSGFQS KTEYLFGKID MQIKLVPGNS AGTVTTFYLK SEGSTWDEID
101: FEFLGNMSGD PYTLHTNVYT QGKGDKEQQF HLWFDPTANF HTYSILWNPQ RIILTVDDTP IREFKNYESL GVLFPKNKPM RMYASLWNAD DWATRGGLVK
201: TDWSKAPFMA SYRNIKIDSK PNSNWYTQEM DSTSQARLKW VQKNYMIYNY CTDHRRFPQG APKECTTSS

Arabidopsis Description

XTH24Xyloglucan endotransglucosylase/hydrolase protein 24 [Source:UniProtKB/Swiss-Prot;Acc:P24806]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.