Factsheet for Os08t0240500-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13578	Sorghum	extracellular	65.07	51.92
Zm00001d050201_P001	Maize	extracellular	64.19	50.52
TraesCS7B01G364300.1	Wheat	extracellular	61.57	49.65
TraesCS7A01G463800.1	Wheat	extracellular	61.14	49.12
HORVU7Hr1G106530.2	Barley	extracellular	61.14	48.78
Os08t0240566-00	Rice	cytosol, extracellular, mitochondrion, plastid	62.88	45.14
Os04t0604200-01	Rice	extracellular	55.9	43.69
Os06t0696566-01	Rice	cytosol, extracellular, mitochondrion	13.97	36.78
Os06t0697000-02	Rice	extracellular	44.1	34.83
Os04t0604300-01	Rice	extracellular	42.36	34.64
Os06t0696400-01	Rice	extracellular	43.67	34.13
Os06t0696600-01	Rice	extracellular	42.79	34.03
Os04t0604800-00	Rice	extracellular	42.79	33.33
Os08t0237800-00	Rice	extracellular, vacuole	43.23	32.67
Os11t0539200-01	Rice	extracellular	34.93	27.12
Os04t0604900-01	Rice	extracellular, vacuole	37.12	26.48

Protein Annotations

Gene3D:2.60.120.200	MapMan:35.1	UniProt:A0A0P0XEA0	ProteinID:BAT04489.1	InterPro:ConA-like_dom_sf	InterPro:GH16
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	EnsemblPlantsGene:Os08g0240500
EnsemblPlants:Os08t0240500-00	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PANTHER:PTHR31062	PANTHER:PTHR31062:SF40
SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000393868A	InterPro:XET_C	InterPro:XTH

Description

XYLOGLUCAN ENDOTRANSGLUCOSYDASE/HYDROLASE 4Glycoside hydrolase, family 16 domain containing protein. (Os08t0240500-00)

Coordinates

chr8:+:8488370..8489782

Molecular Weight (calculated)

26133.1 Da

IEP (calculated)

8.550

GRAVY (calculated)

-0.331

Length

229 amino acids

Sequence
(BLAST)

001: MGQARAHLLA SLWAFYLILA ISMVTGDLTN DLDILWGNSK VFYDNSGKQT ISLTLDRWTT SAFRSKSTYL FSRIDMDIKL VAGDSAGTVT TLYVSGQGMN
101: RLLILVDDKL IRQIKNNLMY SVPYPTYQPM RVYGSIWNAD DWATMGGRVK TDWSQAPFTA YFRNYRAIAC PPQQSSPLCG QSSGNWFNQE LDVTRKQQLQ
201: EVDANYKIYD YCTDTKRFKD NLPKECTIN

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.