Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d050201_P001 | Maize | extracellular | 90.24 | 89.0 |
| Os08t0240500-00 | Rice | extracellular | 51.92 | 65.07 |
| TraesCS7B01G364300.1 | Wheat | extracellular | 60.28 | 60.92 |
| HORVU7Hr1G106530.2 | Barley | extracellular | 60.28 | 60.28 |
| TraesCS7A01G463800.1 | Wheat | extracellular | 58.88 | 59.3 |
| EES13579 | Sorghum | vacuole | 52.26 | 51.55 |
| EES12801 | Sorghum | extracellular | 52.96 | 50.16 |
| EES12802 | Sorghum | endoplasmic reticulum, extracellular | 46.69 | 47.18 |
| EER88885 | Sorghum | extracellular | 43.55 | 42.81 |
| EER90302 | Sorghum | extracellular | 42.86 | 42.71 |
| KXG24787 | Sorghum | vacuole | 43.55 | 42.66 |
| EES11382 | Sorghum | extracellular, vacuole | 42.51 | 40.94 |
| EER90303 | Sorghum | extracellular, golgi, vacuole | 42.86 | 40.86 |
| EES04929 | Sorghum | extracellular, vacuole | 40.42 | 40.0 |
| EES13577 | Sorghum | extracellular | 39.37 | 39.51 |
| EES04926 | Sorghum | extracellular, vacuole | 39.72 | 38.64 |
| EER89799 | Sorghum | vacuole | 39.37 | 38.44 |
| OQU75596 | Sorghum | cytosol, extracellular, plastid | 21.25 | 37.65 |
| EER88886 | Sorghum | golgi | 39.72 | 36.19 |
| OQU83588 | Sorghum | extracellular | 37.98 | 35.97 |
| KXG36371 | Sorghum | extracellular | 36.59 | 32.92 |
| EER91282 | Sorghum | extracellular, vacuole | 35.54 | 31.68 |
| EES11493 | Sorghum | extracellular, vacuole | 35.54 | 31.38 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:8086098 | UniProt:C5YJE6 | InterPro:ConA-like_dom_sf | EnsemblPlants:EES13578 |
| ProteinID:EES13578 | ProteinID:EES13578.1 | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 |
| GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 |
| GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 |
| ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF40 | EnsemblPlantsGene:SORBI_3007G086300 | SUPFAM:SSF49899 |
| SignalP:SignalP-noTM | UniParc:UPI0001A87C10 | InterPro:XET_C | RefSeq:XP_002444083.1 | InterPro:XTH | SEG:seg |
Description
hypothetical protein
Coordinates
chr7:+:11451821..11453305
Molecular Weight (calculated)
32913.7 Da
IEP (calculated)
8.086
GRAVY (calculated)
-0.512
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKARAHQLL ASLAAIYLIL AVTQHVTGNL TDDLEVMWGN AKFVTDSSGQ QAIALALDRS TSSAFRSKKT CQFCRVDIEI KLVPGNSAGT VTTFYMITEN
101: PWQFHDEIDI EFLGNSSGQP YTMHTNMYAR GQGGREKQYK FDFNPTQDYH KYTIIWNKDW ILFLVDDKLY RQIKNNQIYG APYPYYYPMR VYATIWNADD
201: WATQGGRVKT DWAQAPFTAY FRNYRAISCD LYQASPLCLP GSGWFDQQLD VSRKQQLAQV ESSNKIYDYC NDSKRYKNGA PKECGVN
101: PWQFHDEIDI EFLGNSSGQP YTMHTNMYAR GQGGREKQYK FDFNPTQDYH KYTIIWNKDW ILFLVDDKLY RQIKNNQIYG APYPYYYPMR VYATIWNADD
201: WATQGGRVKT DWAQAPFTAY FRNYRAISCD LYQASPLCLP GSGWFDQQLD VSRKQQLAQV ESSNKIYDYC NDSKRYKNGA PKECGVN
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.