CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024378_P001	Maize	extracellular	87.06	86.76
Os08t0237800-00	Rice	extracellular, vacuole	68.88	65.02
KXG24787	Sorghum	vacuole	64.69	63.14
TraesCS6B01G368300.1	Wheat	extracellular	63.29	61.36
TraesCS6D01G318500.1	Wheat	extracellular	62.24	60.34
TraesCS6A01G337600.1	Wheat	extracellular	61.54	59.66
EES12802	Sorghum	endoplasmic reticulum, extracellular	48.6	48.94
EES11382	Sorghum	extracellular, vacuole	49.3	47.32
EER88885	Sorghum	extracellular	45.8	44.86
EES12801	Sorghum	extracellular	46.15	43.56
EES13579	Sorghum	vacuole	44.06	43.3
EER90303	Sorghum	extracellular, golgi, vacuole	45.1	42.86
EER90302	Sorghum	extracellular	41.61	41.32
EES13578	Sorghum	extracellular	39.51	39.37
EER91282	Sorghum	extracellular, vacuole	42.66	37.89
OQU83588	Sorghum	extracellular	39.86	37.62
EES11493	Sorghum	extracellular, vacuole	42.66	37.54
EER88886	Sorghum	golgi	40.91	37.14
EES04929	Sorghum	extracellular, vacuole	37.41	36.9
EER89799	Sorghum	vacuole	37.76	36.73
OQU75596	Sorghum	cytosol, extracellular, plastid	20.63	36.42
EES04926	Sorghum	extracellular, vacuole	36.71	35.59
KXG36371	Sorghum	extracellular	36.71	32.92

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EntrezGene:8086092	InterPro:Beta_glucanase	UniProt:C5YJD9	InterPro:ConA-like_dom_sf
EnsemblPlants:EES13577	ProteinID:EES13577	ProteinID:EES13577.1	InterPro:GH16	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF58	EnsemblPlantsGene:SORBI_3007G085600	SUPFAM:SSF49899
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0001A87C0F	InterPro:XET_C	RefSeq:XP_002444082.1	InterPro:XTH
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:10828539..10829956

Molecular Weight (calculated)

32051.7 Da

IEP (calculated)

6.029

GRAVY (calculated)

-0.336

Length

286 amino acids

Sequence
(BLAST)

001: MAAPFPSSCS RARMAVVVAL LLVTTAAAPA AVALLKDDIE FMWGPDHSFF SDDGNTLALC LEKTHGSGFR SKGAYLYARY DIDVKLVANN SAGTVTTVYL
101: TTDDVRPGYH DEVDMEFLGN VTGEPYTLHT NIFVDSVGNR EQQFRLWFDP TKDFHTYSVQ WTPKNIIFLI DGTPIRVYKH EPWRGGTFPT QRHMRLDGSL
201: WNADDWATQG GRVKTDWMHA PFYAYYRNLR VTPCAASPSP GVASCSDEPP ASAALQKVRA QHLLYDYCED QNRFKDMGLP KECTAD

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.