CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 2
mitochondrion 2
vacuole 3
extracellular 4
endoplasmic reticulum 2
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015977_P001	Maize	mitochondrion	91.19	89.37
TraesCS2A01G089000.1	Wheat	extracellular	72.2	75.0
TraesCS2B01G104700.1	Wheat	extracellular	71.19	73.68
TraesCS2D01G086800.1	Wheat	extracellular	70.51	73.5
HORVU2Hr1G014530.3	Barley	extracellular	70.51	66.67
EES04929	Sorghum	extracellular, vacuole	64.75	65.86
OQU75596	Sorghum	cytosol, extracellular, plastid	32.2	58.64
EER89799	Sorghum	vacuole	57.29	57.48
GSMUA_Achr8P19740_001	Banana	extracellular	49.15	53.9
EER90302	Sorghum	extracellular	47.8	48.96
GSMUA_Achr7P10940_001	Banana	extracellular	44.75	47.48
VIT_11s0016g03480.t01	Wine grape	extracellular	46.44	47.08
Solyc12g007260.1.1	Tomato	extracellular	46.44	46.92
KRH41530	Soybean	nucleus	44.41	46.29
GSMUA_Achr3P03390_001	Banana	extracellular	46.1	46.26
Solyc12g007270.1.1	Tomato	extracellular	45.76	46.08
Solyc12g007250.1.1	Tomato	extracellular	45.42	46.05
EER88885	Sorghum	extracellular	45.42	45.89
EER90303	Sorghum	extracellular, golgi, vacuole	45.76	44.85
EES12802	Sorghum	endoplasmic reticulum, extracellular	43.05	44.72
KRH39331	Soybean	nucleus	43.73	44.64
AT4G28850.1	Thale cress	extracellular	44.07	44.52
KRH76320	Soybean	nucleus	43.05	43.94
CDY35228	Canola	extracellular	43.39	43.84
Bra011066.1-P	Field mustard	extracellular	43.05	43.49
CDY06861	Canola	extracellular	43.05	43.49
EES11382	Sorghum	extracellular, vacuole	42.03	41.61
OQU83588	Sorghum	extracellular	41.69	40.59
EES13578	Sorghum	extracellular	38.64	39.72
EES13579	Sorghum	vacuole	38.64	39.18
KXG24787	Sorghum	vacuole	38.31	38.57
EER88886	Sorghum	golgi	41.02	38.41
EES12801	Sorghum	extracellular	37.97	36.96
EES13577	Sorghum	extracellular	35.59	36.71
EER91282	Sorghum	extracellular, vacuole	40.0	36.65
EES11493	Sorghum	extracellular, vacuole	40.0	36.31
KXG36371	Sorghum	extracellular	38.98	36.05

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EntrezGene:8060390	UniProt:C5Y033	InterPro:ConA-like_dom_sf	EnsemblPlants:EES04926
ProteinID:EES04926	ProteinID:EES04926.1	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF95	EnsemblPlantsGene:SORBI_3004G126700	SUPFAM:SSF49899
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A85398	InterPro:XET_C	RefSeq:XP_002451950.1	InterPro:XTH
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:15151752..15153622

Molecular Weight (calculated)

32398.0 Da

IEP (calculated)

4.871

GRAVY (calculated)

-0.146

Length

295 amino acids

Sequence
(BLAST)

001: MIMGEQRNPT RQLMSSSLLA LFFASSVLVG LAAGGSFYEE CDATWEPQNC WAYDDGNRLS LALVSSSSGS MIRSKRQFVY GTVSTMIQLV PGDSAGTVTT
101: FYTSSLGDNH DEIDFEFLGN VSGQPYTIHT NVYAAGVGNK EMQFKPWFDP TADYHNYTIS WTPCMIVWYI DGVPIRVFRN YAASHGVAFP TSQPMYAYSS
201: IWAAEDWATQ GGRVKADWSK APFVASYHGI DLDVCECYGG GCVSACAGGC SSSLSDAQVG KMQWVQSSYR IYDYCVDPKR LVNGQKPVEC GLPQH

Best Arabidopsis Sequence Match ( AT4G25820.1 )
(BLAST)

001: MACFATKQPL LLSLLLAIGF FVVAASAGNF YESFDITWGN GRANIFENGQ LLTCTLDKVS GSGFQSKKEY LFGKIDMKLK LVAGNSAGTV TAYYLSSKGT
101: AWDEIDFEFL GNRTGHPYTI HTNVFTGGKG DREMQFRLWF DPTADFHTYT VHWNPVNIIF LVDGIPIRVF KNNEKNGVAY PKNQPMRIYS SLWEADDWAT
201: EGGRVKIDWS NAPFKASYRN FNDQSSCSRT SSSKWVTCEP NSNSWMWTTL NPAQYGKMMW VQRDFMIYNY CTDFKRFPQG LPKECKL

Arabidopsis Description

XTH14Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UTG4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.