Factsheet for Zm00001d015977_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
vacuole 2
extracellular 2
endoplasmic reticulum 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04926	Sorghum	extracellular, vacuole	89.37	91.19
TraesCS2A01G089000.1	Wheat	extracellular	71.1	75.35
TraesCS2B01G104700.1	Wheat	extracellular	70.76	74.74
TraesCS2D01G086800.1	Wheat	extracellular	70.1	74.56
Zm00001d053320_P001	Maize	vacuole	65.78	68.04
HORVU2Hr1G014530.3	Barley	extracellular	68.77	66.35
Zm00001d046007_P001	Maize	extracellular	57.48	58.64
GSMUA_Achr8P19740_001	Banana	extracellular	47.51	53.16
GSMUA_Achr7P10940_001	Banana	extracellular	44.19	47.84
GSMUA_Achr3P03390_001	Banana	extracellular	45.85	46.94
KRH41530	Soybean	nucleus	43.85	46.64
VIT_11s0016g03480.t01	Wine grape	extracellular	44.85	46.39
Solyc12g007260.1.1	Tomato	extracellular	44.85	46.23
Solyc12g007270.1.1	Tomato	extracellular	44.85	46.08
Zm00001d014613_P001	Maize	plasma membrane	44.19	45.86
Zm00001d014617_P001	Maize	extracellular	45.18	45.64
Zm00001d026250_P001	Maize	extracellular, vacuole	41.2	45.42
Solyc12g007250.1.1	Tomato	extracellular	43.85	45.36
Zm00001d009309_P001	Maize	extracellular, vacuole	40.86	44.4
AT4G28850.1	Thale cress	extracellular	42.86	44.18
KRH39331	Soybean	nucleus	42.19	43.94
Zm00001d002410_P001	Maize	extracellular	40.2	43.68
CDY35228	Canola	extracellular	42.19	43.49
KRH76320	Soybean	nucleus	41.53	43.25
Bra011066.1-P	Field mustard	extracellular	41.86	43.15
CDY06861	Canola	extracellular	41.86	43.15
Zm00001d026251_P001	Maize	extracellular	40.2	41.72
Zm00001d052651_P001	Maize	extracellular	39.2	39.73
Zm00001d050201_P001	Maize	extracellular	36.54	37.8
Zm00001d002412_P001	Maize	extracellular	36.54	36.91
Zm00001d014615_P002	Maize	extracellular	45.85	36.6
Zm00001d014614_P001	Maize	nucleus, plastid	45.85	36.6
Zm00001d024392_P001	Maize	mitochondrion	37.21	35.56
Zm00001d024378_P001	Maize	extracellular	33.55	35.19
Zm00001d021667_P001	Maize	plasma membrane	37.87	34.55
Zm00001d002193_P003	Maize	extracellular, vacuole	38.21	34.12

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A1D6H4U7	ProteinID:AQK69846.1	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF95	SUPFAM:SSF49899
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000220DC7C	InterPro:XET_C	InterPro:XTH	EnsemblPlantsGene:Zm00001d015977
EnsemblPlants:Zm00001d015977_P001	EnsemblPlants:Zm00001d015977_T001	SEG:seg	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase protein 26

Coordinates

chr5:-:135998432..136000046

Molecular Weight (calculated)

33000.6 Da

IEP (calculated)

4.871

GRAVY (calculated)

-0.098

Length

301 amino acids

Sequence
(BLAST)

001: MMITGGQRNP ARLQVSSSFL LALVFASSVL VGIVAGGSFY EECDATWEPQ NCWAYDDGNR LSLALVSSSS GSMIRSKRQF VYGTVSTMIQ LVPGDSAGTV
101: TTYYTSSLGD NHDEIDFEFL GNVSGQPYTI HTNVYAAGVG NKEMQFKPWF DPTADYHNYT ISWTPCMIAW YVDGVPIRVF RNYAASHGVA FPTSQPMYAY
201: SSIWAAEDWA TQGGRVKADW SKAPFVANYH GIDLGVCECY GGGACVSSCA AAFAASHCSL SDAQVGEMRW VQGSYRIYDY CVDPKRLVNG QRPVECDLPQ
301: Y

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.