Factsheet for Zm00001d002410_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026250_P001	Maize	extracellular, vacuole	87.0	88.28
EES12802	Sorghum	endoplasmic reticulum, extracellular	90.25	88.03
Os04t0604300-01	Rice	extracellular	77.98	77.14
TraesCS2B01G454800.1	Wheat	extracellular	73.29	72.5
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	72.92	72.14
TraesCS2A01G433800.1	Wheat	endoplasmic reticulum, extracellular	71.84	71.07
Zm00001d009309_P001	Maize	extracellular, vacuole	51.62	51.62
Zm00001d014617_P001	Maize	extracellular	55.23	51.34
Zm00001d002412_P001	Maize	extracellular	55.23	51.34
Zm00001d014613_P001	Maize	plasma membrane	52.35	50.0
Zm00001d026251_P001	Maize	extracellular	49.46	47.24
Zm00001d050201_P001	Maize	extracellular	48.01	45.7
Zm00001d024378_P001	Maize	extracellular	45.49	43.9
Zm00001d024392_P001	Maize	mitochondrion	49.46	43.49
Zm00001d046007_P001	Maize	extracellular	44.4	41.69
Zm00001d053320_P001	Maize	vacuole	43.68	41.58
Zm00001d052651_P001	Maize	extracellular	43.32	40.4
Zm00001d015977_P001	Maize	mitochondrion	43.68	40.2
Zm00001d014614_P001	Maize	nucleus, plastid	52.35	38.46
Zm00001d014615_P002	Maize	extracellular	52.35	38.46
Zm00001d021667_P001	Maize	plasma membrane	42.6	35.76
Zm00001d002193_P003	Maize	extracellular, vacuole	41.52	34.12

Protein Annotations

EntrezGene:100283318	Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A1D6E0F6	InterPro:ConA-like_dom_sf	InterPro:GH16
InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757
ProteinID:ONM14221.1	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF94	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0002217A8D	InterPro:XET_C
InterPro:XTH	EnsemblPlantsGene:Zm00001d002410	EnsemblPlants:Zm00001d002410_P001	EnsemblPlants:Zm00001d002410_T001	SEG:seg	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 21

Coordinates

chr2:+:12121541..12122951

Molecular Weight (calculated)

30484.3 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.388

Length

277 amino acids

Sequence
(BLAST)

001: MASAFSSRAC ALLALLLGLC TAGAAAGRVD DGLEVTWGDG RGSVSPDGQV LTLSLDRTSG SGFRSKDTYL FARADVQIKL VPDNSAGTVT TFYFISEGPW
101: DVHDEVDLEF LGNASGQPYT LHTNVYASGN GSREQQFHLW FDPTADFHTY SIQWTQQHIL VLVDGTPIRE FKNHADRGVP YPSSQRMRLY GSLWDAEDWA
201: TQGGRVKTDW SRAPFVAQYR NFTAAPPATA AAGQYGQQMD AEAQQAMKWA RDNYMVYDYC ADTKRFSQGA PPECSMA

Best Arabidopsis Sequence Match ( AT4G30270.1 )
(BLAST)

001: MSPFKIFFFT TLLVAAFSVS AADFNTDVNV AWGNGRGKIL NNGQLLTLSL DKSSGSGFQS KTEYLFGKID MQIKLVPGNS AGTVTTFYLK SEGSTWDEID
101: FEFLGNMSGD PYTLHTNVYT QGKGDKEQQF HLWFDPTANF HTYSILWNPQ RIILTVDDTP IREFKNYESL GVLFPKNKPM RMYASLWNAD DWATRGGLVK
201: TDWSKAPFMA SYRNIKIDSK PNSNWYTQEM DSTSQARLKW VQKNYMIYNY CTDHRRFPQG APKECTTSS

Arabidopsis Description

XTH24Xyloglucan endotransglucosylase/hydrolase protein 24 [Source:UniProtKB/Swiss-Prot;Acc:P24806]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.