Factsheet for Zm00001d052651_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 20408568
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83588	Sorghum	extracellular	94.28	92.41
TraesCS4D01G142800.1	Wheat	extracellular	85.52	86.39
TraesCS4A01G172600.1	Wheat	unclear	85.52	86.39
TraesCSU01G175000.1	Wheat	vacuole	85.52	86.39
Os11t0539200-01	Rice	extracellular	85.19	85.76
GSMUA_Achr8P34300_001	Banana	cytosol	76.09	82.48
HORVU4Hr1G028720.1	Barley	extracellular, vacuole	83.84	82.45
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	72.73	77.42
AT5G13870.2	Thale cress	extracellular, vacuole	73.06	74.06
CDX69621	Canola	vacuole	73.06	74.06
VIT_01s0150g00460.t01	Wine grape	extracellular	76.43	73.94
CDY09832	Canola	vacuole	72.73	73.72
KRG94750	Soybean	endoplasmic reticulum	73.06	73.56
Bra006220.1-P	Field mustard	vacuole	72.05	73.04
CDY69237	Canola	extracellular	72.39	72.88
KRH06776	Soybean	endoplasmic reticulum	72.39	72.88
CDX93096	Canola	extracellular	72.39	72.88
Bra013164.1-P	Field mustard	extracellular	72.05	72.54
KRH70105	Soybean	nucleus	75.08	72.17
CDX78542	Canola	vacuole	72.05	71.81
CDX70524	Canola	vacuole	71.38	71.14
AT2G06850.1	Thale cress	extracellular	70.03	70.27
PGSC0003DMT400005591	Potato	extracellular	68.69	68.92
KRG94748	Soybean	extracellular, vacuole	59.6	68.34
Solyc11g040140.1.1	Tomato	extracellular	68.69	68.0
KRH06775	Soybean	endoplasmic reticulum	74.07	63.77
Zm00001d014613_P001	Maize	plasma membrane	47.81	48.97
Zm00001d014617_P001	Maize	extracellular	48.15	47.99
Zm00001d009309_P001	Maize	extracellular, vacuole	43.1	46.21
Zm00001d026250_P001	Maize	extracellular, vacuole	40.4	43.96
Zm00001d002410_P001	Maize	extracellular	40.4	43.32
Zm00001d021667_P001	Maize	plasma membrane	47.14	42.42
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	62.96	42.31
Zm00001d002193_P003	Maize	extracellular, vacuole	47.14	41.54
Zm00001d024378_P001	Maize	extracellular	38.38	39.72
Zm00001d046007_P001	Maize	extracellular	39.39	39.66
Zm00001d002412_P001	Maize	extracellular	39.73	39.6
Zm00001d015977_P001	Maize	mitochondrion	39.73	39.2
Zm00001d053320_P001	Maize	vacuole	38.05	38.83
Zm00001d026251_P001	Maize	extracellular	37.71	38.62
Zm00001d050201_P001	Maize	extracellular	37.37	38.14
Zm00001d014615_P002	Maize	extracellular	45.12	35.54
Zm00001d014614_P001	Maize	nucleus, plastid	45.12	35.54
Zm00001d024392_P001	Maize	mitochondrion	37.37	35.24

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	ProteinID:AQK57574.1	UniProt:B4G1Z2	EMBL:BT043380	InterPro:ConA-like_dom_sf
InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF97	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI00017B7C64	InterPro:XET_C
InterPro:XTH	EnsemblPlantsGene:Zm00001d052651	EnsemblPlants:Zm00001d052651_P001	EnsemblPlants:Zm00001d052651_T001	SEG:seg	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 5

Coordinates

chr4:-:195816208..195818206

Molecular Weight (calculated)

34103.8 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.493

Length

297 amino acids

Sequence
(BLAST)

001: MATARWLQVA AMAVALLAEW ATAAAPRKPV DVPFQKNYVP TWAQDHIHYI DGGREVQLYL DKSTGTGFQT RGSYLFGHFS MHMKLVGGDS AGTVTAFYLS
101: SQNSEHDEID FEFLGNRTGQ PYILQTNVFT GGKGDREQRI YLWFDPTKEY HSYSVLWNLY MIAFFVDDVP IRVFKNTSAD LGVRYPFSQP MKLYSSLWNA
201: DDWATRGGRE KTDWSNAPFV ASYRGFHVDG CEASAEARFC ATQGARWWDQ PEFRDLDAAQ YRRLAEVRRR YTIYNYCTDR DRYGAAVPPE CARDRDV

Best Arabidopsis Sequence Match ( AT5G13870.3 )
(BLAST)

001: MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI

Arabidopsis Description

XTH5Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.