Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93096 | Canola | extracellular | 95.61 | 95.93 |
| Bra013164.1-P | Field mustard | extracellular | 95.61 | 95.93 |
| CDY69237 | Canola | extracellular | 94.93 | 95.25 |
| GSMUA_Achr8P34300_001 | Banana | cytosol | 71.96 | 77.74 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 75.68 | 76.45 |
| KRH06776 | Soybean | endoplasmic reticulum | 74.32 | 74.58 |
| KRG94750 | Soybean | endoplasmic reticulum | 73.99 | 74.24 |
| PGSC0003DMT400005591 | Potato | extracellular | 72.3 | 72.3 |
| KRH70105 | Soybean | nucleus | 75.34 | 72.17 |
| TraesCS4D01G142800.1 | Wheat | extracellular | 71.62 | 72.11 |
| TraesCS4A01G172600.1 | Wheat | unclear | 71.62 | 72.11 |
| TraesCSU01G175000.1 | Wheat | vacuole | 71.28 | 71.77 |
| Solyc11g040140.1.1 | Tomato | extracellular | 71.96 | 71.0 |
| Os11t0539200-01 | Rice | extracellular | 70.27 | 70.51 |
| Zm00001d052651_P001 | Maize | extracellular | 70.27 | 70.03 |
| HORVU4Hr1G028720.1 | Barley | extracellular, vacuole | 70.95 | 69.54 |
| KRG94748 | Soybean | extracellular, vacuole | 60.81 | 69.5 |
| OQU83588 | Sorghum | extracellular | 70.61 | 68.98 |
| KRH06775 | Soybean | endoplasmic reticulum | 74.32 | 63.77 |
| AT4G14130.1 | Thale cress | extracellular | 48.99 | 50.17 |
| AT4G30270.1 | Thale cress | extracellular | 45.27 | 49.81 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 48.31 | 49.14 |
| AT5G57540.1 | Thale cress | extracellular | 46.62 | 48.59 |
| AT5G57530.1 | Thale cress | extracellular | 46.28 | 48.07 |
| AT4G25810.1 | Thale cress | extracellular | 46.28 | 47.9 |
| AT1G11545.1 | Thale cress | extracellular | 48.99 | 47.54 |
| AT5G57560.1 | Thale cress | extracellular | 45.61 | 47.54 |
| AT5G65730.1 | Thale cress | extracellular | 46.62 | 47.26 |
| AT5G57550.1 | Thale cress | extracellular | 45.27 | 47.18 |
| AT4G03210.1 | Thale cress | extracellular | 45.95 | 46.9 |
| AT4G37800.1 | Thale cress | extracellular, vacuole | 45.95 | 46.42 |
| AT4G25820.1 | Thale cress | extracellular | 44.59 | 45.99 |
| AT2G18800.1 | Thale cress | extracellular | 45.61 | 44.26 |
| AT2G14620.1 | Thale cress | vacuole | 42.91 | 42.47 |
| AT4G28850.1 | Thale cress | extracellular | 40.54 | 41.1 |
| GSMUA_Achr7P02620_001 | Banana | endoplasmic reticulum, extracellular | 58.45 | 39.14 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:815247 | UniProt:A0A178VUP5 | ProteinID:AAC98464.1 | ProteinID:AAD45123.1 |
| ProteinID:AEC06021.1 | EMBL:AF386928 | ArrayExpress:AT2G06850 | EnsemblPlantsGene:AT2G06850 | RefSeq:AT2G06850 | TAIR:AT2G06850 |
| RefSeq:AT2G06850-TAIR-G | EnsemblPlants:AT2G06850.1 | TAIR:AT2G06850.1 | EMBL:AY054547 | EMBL:AY056201 | EMBL:AY059873 |
| EMBL:AY064672 | EMBL:AY085465 | EMBL:AY114644 | InterPro:Beta_glucanase | InterPro:ConA-like_dom_sf | EMBL:D16454 |
| Symbol:EXGT-A1 | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 | GO:GO:0009506 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009605 | GO:GO:0009612 | GO:GO:0009628 | GO:GO:0009645 |
| GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009826 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0030312 | GO:GO:0040007 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
| InterPro:IPR000757 | RefSeq:NP_178708.1 | ProteinID:OAP10110.1 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007006 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0020142 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00737 | ScanProsite:PS01034 |
| PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF97 | UniProt:Q39099 | SUPFAM:SSF49899 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI00000484F8 | InterPro:XET_C | InterPro:XTH | : | : |
Description
XTH4Xyloglucan endotransglucosylase/hydrolase protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39099]
Coordinates
chr2:+:2763449..2765743
Molecular Weight (calculated)
34292.8 Da
IEP (calculated)
9.200
GRAVY (calculated)
-0.405
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVSSSPWAL MALFLMVSST MVMAIPPRKA IDVPFGRNYV PTWAFDHQKQ FNGGSELQLI LDKYTGTGFQ SKGSYLFGHF SMHIKLPAGD TAGVVTAFYL
101: SSTNNEHDEI DFEFLGNRTG QPAILQTNVF TGGKGNREQR IYLWFDPSKA YHTYSILWNM YQIVFFVDNI PIRTFKNAKD LGVRFPFNQP MKLYSSLWNA
201: DDWATRGGLE KTNWANAPFV ASYKGFHIDG CQASVEAKYC ATQGRMWWDQ KEFRDLDAEQ WRRLKWVRMK WTIYNYCTDR TRFPVMPAEC KRDRDA
101: SSTNNEHDEI DFEFLGNRTG QPAILQTNVF TGGKGNREQR IYLWFDPSKA YHTYSILWNM YQIVFFVDNI PIRTFKNAKD LGVRFPFNQP MKLYSSLWNA
201: DDWATRGGLE KTNWANAPFV ASYKGFHIDG CQASVEAKYC ATQGRMWWDQ KEFRDLDAEQ WRRLKWVRMK WTIYNYCTDR TRFPVMPAEC KRDRDA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.