Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- plastid 1
- vacuole 6
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040716.1-P | Field mustard | vacuole | 86.62 | 87.21 |
| CDX71167 | Canola | vacuole | 86.29 | 86.87 |
| VIT_03s0088g00650.t01 | Wine grape | extracellular, vacuole | 70.57 | 71.53 |
| KRH35625 | Soybean | vacuole | 69.57 | 70.27 |
| KRG91154 | Soybean | extracellular | 69.23 | 69.93 |
| GSMUA_Achr1P14290_001 | Banana | vacuole | 66.89 | 67.57 |
| Solyc01g106650.2.1 | Tomato | extracellular, vacuole | 62.54 | 63.82 |
| PGSC0003DMT400013128 | Potato | extracellular | 33.78 | 63.12 |
| AT4G37800.1 | Thale cress | extracellular, vacuole | 44.82 | 45.73 |
| AT4G30270.1 | Thale cress | extracellular | 40.47 | 44.98 |
| AT4G03210.1 | Thale cress | extracellular | 43.48 | 44.83 |
| AT5G57540.1 | Thale cress | extracellular | 42.47 | 44.72 |
| AT5G57530.1 | Thale cress | extracellular | 42.47 | 44.56 |
| AT5G65730.1 | Thale cress | extracellular | 43.48 | 44.52 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 43.14 | 44.03 |
| AT5G57550.1 | Thale cress | extracellular | 41.81 | 44.01 |
| AT4G25810.1 | Thale cress | extracellular | 41.14 | 43.01 |
| AT2G06850.1 | Thale cress | extracellular | 42.47 | 42.91 |
| AT4G25820.1 | Thale cress | extracellular | 41.14 | 42.86 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 41.47 | 42.61 |
| AT4G28850.1 | Thale cress | extracellular | 41.47 | 42.47 |
| AT2G18800.1 | Thale cress | extracellular | 43.14 | 42.3 |
| AT4G14130.1 | Thale cress | extracellular | 40.47 | 41.87 |
| AT1G11545.1 | Thale cress | extracellular | 42.47 | 41.64 |
| AT5G57560.1 | Thale cress | extracellular | 38.13 | 40.14 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:815950 | ProteinID:AAC69380.1 | ProteinID:AEC06315.1 | ArrayExpress:AT2G14620 |
| EnsemblPlantsGene:AT2G14620 | RefSeq:AT2G14620 | TAIR:AT2G14620 | RefSeq:AT2G14620-TAIR-G | EnsemblPlants:AT2G14620.1 | TAIR:AT2G14620.1 |
| EMBL:AY070415 | EMBL:AY096596 | Unigene:At.28362 | InterPro:ConA-like_dom_sf | InterPro:GH16 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 |
| GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | RefSeq:NP_179069.1 | PFAM:PF00722 |
| PFAM:PF06955 | PIRSF:PIRSF005604 | PO:PO:0000013 | PO:PO:0000230 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0025022 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF37 | UniProt:Q9ZVK1 | SUPFAM:SSF49899 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000048508 | InterPro:XET_C | InterPro:XTH | Symbol:XTH10 |
Description
XTH10Probable xyloglucan endotransglucosylase/hydrolase protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVK1]
Coordinates
chr2:+:6244772..6246279
Molecular Weight (calculated)
34688.9 Da
IEP (calculated)
8.292
GRAVY (calculated)
-0.412
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLINRSKPF VLLVGFSIIS SLLLWVSQAS VVSSGDFNKD FFVTWSPTHV NTSNDGRSRT LKLDQESGAS FSSIQTFLFG QIDMKIKLIR GSSQGTVVAY
101: YMSSDQPNRD EIDFEFLGNV NGQPYILQTN VYAEGLDNRE ERIHLWFDPA KDFHTYSILW NIHQIVFMVD QIPIRLYRNH GEKGVAYPRL QPMSVQASLW
201: NGESWATRGG HDKIDWSKGP FVASFGDYKI DACIWIGNTS FCNGESTENW WNKNEFSSLT RVQKRWFKWV RKYHLIYDYC QDYGRFNNKL PKECSLPKY
101: YMSSDQPNRD EIDFEFLGNV NGQPYILQTN VYAEGLDNRE ERIHLWFDPA KDFHTYSILW NIHQIVFMVD QIPIRLYRNH GEKGVAYPRL QPMSVQASLW
201: NGESWATRGG HDKIDWSKGP FVASFGDYKI DACIWIGNTS FCNGESTENW WNKNEFSSLT RVQKRWFKWV RKYHLIYDYC QDYGRFNNKL PKECSLPKY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.