Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020434.1-P | Field mustard | extracellular | 89.44 | 89.12 |
| Bra002722.1-P | Field mustard | extracellular | 86.27 | 86.27 |
| CDY25904 | Canola | extracellular | 86.27 | 86.27 |
| CDY67778 | Canola | extracellular | 86.27 | 86.27 |
| GSMUA_Achr4P02240_001 | Banana | cytosol, mitochondrion, nucleus | 52.46 | 77.2 |
| GSMUA_Achr10P... | Banana | cytosol | 51.06 | 72.86 |
| GSMUA_Achr3P05220_001 | Banana | cytosol | 52.82 | 72.12 |
| GSMUA_Achr7P16430_001 | Banana | cytosol | 52.82 | 70.42 |
| GSMUA_Achr9P13820_001 | Banana | cytosol | 51.41 | 69.86 |
| HORVU7Hr1G098320.3 | Barley | vacuole | 69.72 | 68.51 |
| GSMUA_Achr5P21880_001 | Banana | cytosol | 51.06 | 68.08 |
| HORVU0Hr1G022110.1 | Barley | extracellular, vacuole | 69.72 | 67.81 |
| TraesCS7D01G418700.1 | Wheat | cytosol, mitochondrion, nucleus | 53.17 | 67.71 |
| TraesCS7A01G427000.1 | Wheat | extracellular | 67.96 | 67.48 |
| VIT_11s0052g01230.t01 | Wine grape | cytosol | 65.85 | 67.27 |
| TraesCS7D01G419300.1 | Wheat | extracellular | 68.66 | 67.24 |
| TraesCS7A01G426100.1 | Wheat | vacuole | 68.31 | 67.13 |
| TraesCS7B01G326900.1 | Wheat | extracellular | 67.61 | 66.44 |
| TraesCS7A01G426900.1 | Wheat | extracellular | 66.9 | 66.43 |
| TraesCS7B01G327200.1 | Wheat | extracellular | 66.9 | 66.43 |
| TraesCS7D01G419100.1 | Wheat | extracellular | 67.25 | 66.32 |
| AT4G25810.1 | Thale cress | extracellular | 66.55 | 66.08 |
| TraesCS7D01G419200.1 | Wheat | extracellular | 66.55 | 66.08 |
| TraesCS7B01G327000.1 | Wheat | extracellular | 67.61 | 65.75 |
| TraesCS7A01G426600.1 | Wheat | vacuole | 66.9 | 65.52 |
| AT4G30270.1 | Thale cress | extracellular | 61.97 | 65.43 |
| HORVU7Hr1G098260.1 | Barley | vacuole | 67.25 | 65.41 |
| TraesCS7A01G426700.1 | Wheat | extracellular | 66.55 | 65.4 |
| Os06t0697000-02 | Rice | extracellular | 66.55 | 65.17 |
| AT5G57560.1 | Thale cress | extracellular | 65.14 | 65.14 |
| Solyc07g006870.2.1 | Tomato | extracellular, vacuole | 63.73 | 64.18 |
| Zm00001d014617_P001 | Maize | extracellular | 67.25 | 64.09 |
| PGSC0003DMT400048242 | Potato | extracellular | 62.32 | 63.44 |
| EER90303 | Sorghum | extracellular, golgi, vacuole | 66.9 | 63.12 |
| GSMUA_Achr3P05200_001 | Banana | cytosol, plastid, vacuole | 43.66 | 62.94 |
| AT4G25820.1 | Thale cress | extracellular | 61.62 | 60.98 |
| TraesCS7D01G418600.1 | Wheat | vacuole | 67.96 | 60.5 |
| AT5G57540.1 | Thale cress | extracellular | 59.86 | 59.86 |
| AT5G57530.1 | Thale cress | extracellular | 59.86 | 59.65 |
| AT4G14130.1 | Thale cress | extracellular | 60.56 | 59.52 |
| HORVU7Hr1G098440.2 | Barley | extracellular | 59.51 | 59.09 |
| TraesCS7D01G419900.1 | Wheat | extracellular | 59.51 | 58.88 |
| AT3G23730.1 | Thale cress | extracellular, vacuole | 60.21 | 58.76 |
| Zm00001d014613_P001 | Maize | plasma membrane | 59.86 | 58.62 |
| TraesCS7A01G427600.1 | Wheat | extracellular | 59.51 | 58.48 |
| AT2G18800.1 | Thale cress | extracellular | 62.68 | 58.36 |
| TraesCS7B01G327700.1 | Wheat | extracellular | 59.15 | 57.93 |
| Os06t0696400-01 | Rice | extracellular | 59.15 | 57.34 |
| Zm00001d009309_P001 | Maize | extracellular, vacuole | 55.63 | 57.04 |
| EER88885 | Sorghum | extracellular | 58.45 | 56.85 |
| HORVU7Hr1G098280.1 | Barley | extracellular, mitochondrion, vacuole | 68.66 | 48.75 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 49.3 | 47.78 |
| AT4G28850.1 | Thale cress | extracellular | 47.18 | 45.89 |
| AT2G06850.1 | Thale cress | extracellular | 47.18 | 45.27 |
| AT4G03210.1 | Thale cress | extracellular | 46.13 | 45.17 |
| AT5G65730.1 | Thale cress | extracellular | 46.13 | 44.86 |
| AT4G37800.1 | Thale cress | extracellular, vacuole | 45.42 | 44.03 |
| AT1G11545.1 | Thale cress | extracellular | 45.42 | 42.3 |
| AT2G14620.1 | Thale cress | vacuole | 44.01 | 41.81 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | EntrezGene:835859 | UniProt:A0A178UD61 | ProteinID:AAD45127.1 | ProteinID:AED96914.1 |
| ArrayExpress:AT5G57550 | EnsemblPlantsGene:AT5G57550 | RefSeq:AT5G57550 | TAIR:AT5G57550 | RefSeq:AT5G57550-TAIR-G | EnsemblPlants:AT5G57550.1 |
| TAIR:AT5G57550.1 | EMBL:AY125495 | EMBL:AY143939 | ProteinID:BAB08790.1 | InterPro:ConA-like_dom_sf | InterPro:GH16 |
| InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009832 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
| InterPro:IPR000757 | RefSeq:NP_568859.2 | ProteinID:OAO91625.1 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 |
| PO:PO:0000013 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007616 | PO:PO:0009025 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF20 | UniProt:Q38907 | SUPFAM:SSF49899 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EMBL:U43485 | UniParc:UPI0000048C90 | InterPro:XET_C | InterPro:XTH |
| Symbol:XTR3 | SEG:seg | : | : | : | : |
Description
XTH25Probable xyloglucan endotransglucosylase/hydrolase protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q38907]
Coordinates
chr5:-:23304782..23306440
Molecular Weight (calculated)
32574.5 Da
IEP (calculated)
8.297
GRAVY (calculated)
-0.461
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSTFILSL LFTLTVSTTT LFSPVFAGTF DTEFDITWGD GRGKVLNNGE LLTLSLDRAS GSGFQTKKEY LFGKIDMQLK LVPGNSAGTV TAYYLKSKGD
101: TWDEIDFEFL GNLTGDPYTM HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH
101: TWDEIDFEFL GNLTGDPYTM HTNVYTQGKG DREQQFHLWF DPTADFHTYS VLWNPHHIVF MVDDIPVREF KNLQHMGIQY PKLQPMRLYS SLWNADQWAT
201: RGGLVKTDWS KAPFTASYRN FRADACVSSG GRSSCPAGSP RWFSQRLDLT AEDKMRVVQR KYMIYNYCTD TKRFPQGFPK ECRH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.