Factsheet for TraesCS7A01G426600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G426100.1	Wheat	vacuole	97.93	98.27
TraesCS7A01G426900.1	Wheat	extracellular	95.86	97.2
TraesCS7A01G427000.1	Wheat	extracellular	95.17	96.5
TraesCS7D01G419200.1	Wheat	extracellular	94.83	96.15
TraesCS7A01G426700.1	Wheat	extracellular	93.45	93.77
Os06t0697000-02	Rice	extracellular	84.48	84.48
EER90303	Sorghum	extracellular, golgi, vacuole	82.76	79.73
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	52.76	79.27
Zm00001d014617_P001	Maize	extracellular	81.38	79.19
GSMUA_Achr3P05220_001	Banana	cytosol	55.52	77.4
GSMUA_Achr10P...	Banana	cytosol	52.07	75.88
GSMUA_Achr7P16430_001	Banana	cytosol	54.83	74.65
GSMUA_Achr5P21880_001	Banana	cytosol	53.79	73.24
GSMUA_Achr9P13820_001	Banana	cytosol	52.76	73.21
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	95.86	69.5
TraesCS7A01G427600.1	Wheat	extracellular	67.24	67.47
AT5G57550.1	Thale cress	extracellular	65.52	66.9
Bra020434.1-P	Field mustard	extracellular	65.52	66.67
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	45.17	66.5
Bra002722.1-P	Field mustard	extracellular	63.1	64.44
CDY67778	Canola	extracellular	63.1	64.44
CDY25904	Canola	extracellular	62.76	64.08
VIT_11s0052g01230.t01	Wine grape	cytosol	61.03	63.67
Solyc07g006870.2.1	Tomato	extracellular, vacuole	59.66	61.35
PGSC0003DMT400048242	Potato	extracellular	58.97	61.29
CDY67779	Canola	extracellular	60.34	61.19
Bra002723.1-P	Field mustard	extracellular	60.34	61.19
CDY67488	Canola	extracellular	59.66	61.13
CDY11863	Canola	extracellular	60.0	60.84
Bra020436.1-P	Field mustard	extracellular	59.31	60.78
AT5G57540.1	Thale cress	extracellular	59.31	60.56
AT5G57530.1	Thale cress	extracellular	59.31	60.35
CDX88627	Canola	extracellular	59.31	60.14
CDY02738	Canola	extracellular, nucleus, vacuole	44.48	60.0
CDY69806	Canola	extracellular	58.28	59.51
Bra013923.1-P	Field mustard	extracellular	58.28	59.51
AT4G25820.1	Thale cress	extracellular	58.62	59.23
TraesCS7A01G427100.1	Wheat	extracellular	57.93	58.95
Bra019141.1-P	Field mustard	extracellular	57.59	58.39
CDY50186	Canola	extracellular	57.59	58.39
TraesCS7A01G427300.1	Wheat	extracellular	57.24	58.25
CDX92733	Canola	extracellular	57.24	58.04
Bra006814.1-P	Field mustard	extracellular	58.62	53.29
TraesCS2A01G433800.1	Wheat	endoplasmic reticulum, extracellular	51.03	52.86
Solyc07g006850.1.1	Tomato	golgi	58.97	50.0
PGSC0003DMT400048240	Potato	golgi	58.28	49.42
TraesCS4A01G172600.1	Wheat	unclear	50.0	49.32
TraesCS2A01G434300.1	Wheat	extracellular	50.69	48.51
TraesCS7A01G463800.1	Wheat	extracellular	46.9	47.72
TraesCS7A01G427200.1	Wheat	extracellular, vacuole	47.93	47.12
TraesCS2A01G047200.1	Wheat	vacuole	46.55	46.55
TraesCS6A01G337600.1	Wheat	extracellular	46.9	46.1
TraesCS2A01G047100.1	Wheat	endoplasmic reticulum, extracellular	46.21	46.05
TraesCS7A01G331200.1	Wheat	vacuole	45.17	45.96
TraesCS2A01G433600.1	Wheat	vacuole	46.9	45.95
TraesCS2A01G498200.1	Wheat	extracellular	45.52	45.67
TraesCS2A01G089000.1	Wheat	extracellular	44.48	45.42
TraesCS2A01G498400.1	Wheat	vacuole	45.17	45.33
TraesCS2A01G498300.1	Wheat	vacuole	45.17	45.33
TraesCS2A01G498500.1	Wheat	vacuole	44.48	44.18
TraesCS2A01G433700.1	Wheat	vacuole	44.83	43.92
TraesCS2A01G433500.1	Wheat	mitochondrion	48.62	42.09

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51257
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF101	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS7A01G426600	EnsemblPlants:TraesCS7A01G426600.1	InterPro:XET_C	InterPro:XTH	TIGR:cd02176	SEG:seg

Description

No Description!

Coordinates

chr7A:-:619575419..619576768

Molecular Weight (calculated)

32245.1 Da

IEP (calculated)

6.622

GRAVY (calculated)

-0.348

Length

290 amino acids

Sequence
(BLAST)

001: MARMAVSVLA ILLAASCALA AASFDKEFDV TWGDGRGKIL NNGQLLTLGL DKVSGSGFQS RHEYLFGKID MQLKLVPGNS AGTVTAYYLS SQGPTHDEID
101: FEFLGNVTGE PYTLHTNVFT QGQGQREQQF RLWFDPTNDF HTYSILWNPK HIILMVDDMP IRDFKNLEGK GIAFPKNQPM RLYSSLWNAD DWATQGGRVK
201: TDWSHAPFSA SYRGFKADAC VVTADGKPHC GASVGTEVAP GTGAAGEWYN QELDLTRQQR MRWVQSNYMI YNYCTDPKRV AKGVPAECSM

Best Arabidopsis Sequence Match ( AT4G30270.1 )
(BLAST)

001: MSPFKIFFFT TLLVAAFSVS AADFNTDVNV AWGNGRGKIL NNGQLLTLSL DKSSGSGFQS KTEYLFGKID MQIKLVPGNS AGTVTTFYLK SEGSTWDEID
101: FEFLGNMSGD PYTLHTNVYT QGKGDKEQQF HLWFDPTANF HTYSILWNPQ RIILTVDDTP IREFKNYESL GVLFPKNKPM RMYASLWNAD DWATRGGLVK
201: TDWSKAPFMA SYRNIKIDSK PNSNWYTQEM DSTSQARLKW VQKNYMIYNY CTDHRRFPQG APKECTTSS

Arabidopsis Description

XTH24Xyloglucan endotransglucosylase/hydrolase protein 24 [Source:UniProtKB/Swiss-Prot;Acc:P24806]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.