Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 2
- golgi 4
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g006850.1.1 | Tomato | golgi | 95.32 | 95.32 |
| GSMUA_Achr4P02240_001 | Banana | cytosol, mitochondrion, nucleus | 38.3 | 67.88 |
| GSMUA_Achr3P05220_001 | Banana | cytosol | 40.35 | 66.35 |
| GSMUA_Achr10P... | Banana | cytosol | 38.6 | 66.33 |
| GSMUA_Achr9P13820_001 | Banana | cytosol | 40.35 | 66.03 |
| GSMUA_Achr5P21880_001 | Banana | cytosol | 40.35 | 64.79 |
| PGSC0003DMT400038413 | Potato | extracellular | 53.51 | 63.99 |
| GSMUA_Achr7P16430_001 | Banana | cytosol | 39.18 | 62.91 |
| TraesCS7D01G418700.1 | Wheat | cytosol, mitochondrion, nucleus | 39.18 | 60.09 |
| VIT_11s0052g01230.t01 | Wine grape | cytosol | 48.83 | 60.07 |
| GSMUA_Achr3P05200_001 | Banana | cytosol, plastid, vacuole | 34.5 | 59.9 |
| TraesCS7A01G426100.1 | Wheat | vacuole | 50.0 | 59.17 |
| HORVU7Hr1G098320.3 | Barley | vacuole | 50.0 | 59.17 |
| TraesCS7A01G427000.1 | Wheat | extracellular | 49.42 | 59.09 |
| TraesCS7B01G326900.1 | Wheat | extracellular | 49.71 | 58.82 |
| HORVU7Hr1G098440.2 | Barley | extracellular | 49.12 | 58.74 |
| TraesCS7D01G419200.1 | Wheat | extracellular | 49.12 | 58.74 |
| TraesCS7D01G419300.1 | Wheat | extracellular | 49.71 | 58.62 |
| HORVU0Hr1G022110.1 | Barley | extracellular, vacuole | 50.0 | 58.56 |
| PGSC0003DMT400036329 | Potato | extracellular | 48.25 | 58.51 |
| TraesCS7B01G327200.1 | Wheat | extracellular | 48.83 | 58.39 |
| TraesCS7A01G426900.1 | Wheat | extracellular | 48.83 | 58.39 |
| TraesCS7A01G426600.1 | Wheat | vacuole | 49.42 | 58.28 |
| PGSC0003DMT400079856 | Potato | extracellular | 48.83 | 58.19 |
| TraesCS7D01G419100.1 | Wheat | extracellular | 48.83 | 57.99 |
| HORVU7Hr1G098260.1 | Barley | vacuole | 49.42 | 57.88 |
| TraesCS7D01G419900.1 | Wheat | extracellular | 48.54 | 57.84 |
| PGSC0003DMT400005949 | Potato | cytosol | 32.75 | 57.73 |
| Os06t0697000-02 | Rice | extracellular | 48.83 | 57.59 |
| TraesCS7B01G327000.1 | Wheat | extracellular | 49.12 | 57.53 |
| PGSC0003DMT400044562 | Potato | extracellular | 48.25 | 57.49 |
| TraesCS7A01G427600.1 | Wheat | extracellular | 48.54 | 57.44 |
| TraesCS7A01G426700.1 | Wheat | extracellular | 48.54 | 57.44 |
| PGSC0003DMT400020314 | Potato | cytosol, nucleus, peroxisome | 45.91 | 57.3 |
| TraesCS7B01G327700.1 | Wheat | extracellular | 48.54 | 57.24 |
| Os06t0696400-01 | Rice | extracellular | 48.83 | 57.0 |
| PGSC0003DMT400044559 | Potato | extracellular | 48.25 | 56.9 |
| PGSC0003DMT400048241 | Potato | extracellular | 47.37 | 56.84 |
| EER90303 | Sorghum | extracellular, golgi, vacuole | 49.71 | 56.48 |
| Zm00001d014617_P001 | Maize | extracellular | 49.12 | 56.38 |
| PGSC0003DMT400048242 | Potato | extracellular | 45.91 | 56.27 |
| PGSC0003DMT400020122 | Potato | extracellular | 47.66 | 56.21 |
| PGSC0003DMT400056316 | Potato | extracellular | 45.32 | 56.16 |
| EER88885 | Sorghum | extracellular | 46.78 | 54.79 |
| TraesCS7D01G418600.1 | Wheat | vacuole | 50.29 | 53.92 |
| Zm00001d014613_P001 | Maize | plasma membrane | 45.61 | 53.79 |
| PGSC0003DMT400011902 | Potato | extracellular | 43.27 | 53.05 |
| Zm00001d009309_P001 | Maize | extracellular, vacuole | 42.4 | 52.35 |
| PGSC0003DMT400026398 | Potato | extracellular | 38.6 | 46.64 |
| PGSC0003DMT400055138 | Potato | extracellular | 39.47 | 45.76 |
| PGSC0003DMT400067358 | Potato | extracellular | 39.47 | 45.61 |
| PGSC0003DMT400005591 | Potato | extracellular | 38.89 | 44.93 |
| PGSC0003DMT400063689 | Potato | vacuole | 38.01 | 43.92 |
| PGSC0003DMT400028324 | Potato | vacuole | 37.72 | 43.73 |
| PGSC0003DMT400013128 | Potato | extracellular | 20.18 | 43.12 |
| HORVU7Hr1G098280.1 | Barley | extracellular, mitochondrion, vacuole | 50.0 | 42.75 |
| PGSC0003DMT400061841 | Potato | extracellular | 36.26 | 42.03 |
| PGSC0003DMT400005342 | Potato | extracellular | 34.8 | 39.93 |
Protein Annotations
| EntrezGene:102581401 | Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
| InterPro:IPR000757 | UniProt:M1BM47 | PFAM:PF00722 | PFAM:PF06955 | EnsemblPlantsGene:PGSC0003DMG401018740 | PGSC:PGSC0003DMG401018740 |
| EnsemblPlants:PGSC0003DMT400048240 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF101 |
| SUPFAM:SSF49899 | TMHMM:TMhelix | UniParc:UPI000294AF6E | InterPro:XET_C | RefSeq:XP_006366190.1 | InterPro:XTH |
| SEG:seg | : | : | : | : | : |
Description
Xyloglucan endotransglucosylase-hydrolase XTH3 [Source:PGSC_GENE;Acc:PGSC0003DMG401018740]
Coordinates
chr7:+:2603252..2607406
Molecular Weight (calculated)
39322.8 Da
IEP (calculated)
9.417
GRAVY (calculated)
-0.357
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MALFSSRNSS RSRSSLPYLV FLLIAAFFVF KVDILISQSF SSARRNLEKT PNRIVVNPKK SSEERVVDSL PVVLVNGTFD QHIMISWGED RGKILENGEF
101: LTLSLDKLSG SGFQSKKEYL FAKVDMQIKL VPGNSAGTVT TFYLSSQGNK HDEIDFEFLG NSTGNPYTLH TNVFSLGQGN REQQFFLWFD PTADYHTYSI
201: LWNSKCIIFY VDGIPIREYK NLERLGVSYL KFQPMRLYSS LWNADDWATQ GGRVKTNWKL APFVASYKNF TYEACIYSRL TSSSSCDIDS PPSTNNAWLT
301: YELDRRSRVR MKALQKKHMI YDYCNDKWRF PKGPAPECKL LQ
101: LTLSLDKLSG SGFQSKKEYL FAKVDMQIKL VPGNSAGTVT TFYLSSQGNK HDEIDFEFLG NSTGNPYTLH TNVFSLGQGN REQQFFLWFD PTADYHTYSI
201: LWNSKCIIFY VDGIPIREYK NLERLGVSYL KFQPMRLYSS LWNADDWATQ GGRVKTNWKL APFVASYKNF TYEACIYSRL TSSSSCDIDS PPSTNNAWLT
301: YELDRRSRVR MKALQKKHMI YDYCNDKWRF PKGPAPECKL LQ
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.