Factsheet for PGSC0003DMT400048241

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g006860.2.1	Tomato	extracellular	94.74	94.74
PGSC0003DMT400038413	Potato	extracellular	70.53	70.28
PGSC0003DMT400036329	Potato	extracellular	67.02	67.73
GSMUA_Achr10P...	Banana	extracellular	65.26	65.96
KRH02889	Soybean	extracellular	66.32	64.95
PGSC0003DMT400056316	Potato	extracellular	62.81	64.86
GSMUA_Achr6P30850_001	Banana	extracellular	63.86	64.54
KRH19006	Soybean	vacuole	65.96	64.16
GSMUA_Achr10P...	Banana	extracellular	63.51	62.85
PGSC0003DMT400011902	Potato	extracellular	60.7	62.01
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	51.58	61.51
PGSC0003DMT400048242	Potato	extracellular	60.0	61.29
PGSC0003DMT400079856	Potato	extracellular	61.05	60.63
PGSC0003DMT400044562	Potato	extracellular	61.05	60.63
AT2G18800.1	Thale cress	extracellular	64.56	60.33
HORVU7Hr1G098370.1	Barley	extracellular	59.65	59.65
TraesCS7B01G327400.1	Wheat	extracellular	59.3	59.3
PGSC0003DMT400005949	Potato	cytosol	40.35	59.28
TraesCS7A01G427100.1	Wheat	extracellular	58.95	58.95
Os06t0696600-01	Rice	extracellular	59.3	58.68
CDY49308	Canola	extracellular	64.56	58.6
TraesCS7A01G427300.1	Wheat	extracellular	58.6	58.6
TraesCS7D01G419400.1	Wheat	vacuole	58.95	58.54
PGSC0003DMT400020314	Potato	cytosol, nucleus, peroxisome	56.14	58.39
EER90302	Sorghum	extracellular	58.6	57.99
PGSC0003DMT400020122	Potato	extracellular	56.49	55.52
PGSC0003DMT400044559	Potato	extracellular	56.14	55.17
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	62.81	54.74
PGSC0003DMT400028324	Potato	vacuole	49.47	47.8
PGSC0003DMT400005591	Potato	extracellular	49.47	47.64
PGSC0003DMT400048240	Potato	golgi	56.84	47.37
PGSC0003DMT400026398	Potato	extracellular	47.02	47.35
PGSC0003DMT400063689	Potato	vacuole	47.72	45.95
PGSC0003DMT400055138	Potato	extracellular	46.67	45.08
PGSC0003DMT400067358	Potato	extracellular	45.61	43.92
PGSC0003DMT400013128	Potato	extracellular	24.21	43.12
PGSC0003DMT400061841	Potato	extracellular	44.56	43.05
Zm00001d014614_P001	Maize	nucleus, plastid	56.14	42.44
Zm00001d014615_P002	Maize	extracellular	56.14	42.44
PGSC0003DMT400005342	Potato	extracellular	44.21	42.28

Protein Annotations

EntrezGene:102581731	Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0042545	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555
GO:GO:0080022	InterPro:IPR000757	UniProt:M1BM48	PFAM:PF00722	PFAM:PF06955	EnsemblPlantsGene:PGSC0003DMG402018740
PGSC:PGSC0003DMG402018740	EnsemblPlants:PGSC0003DMT400048241	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062
PANTHER:PTHR31062:SF101	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI000294F2CC	InterPro:XET_C	RefSeq:XP_006366191.1
InterPro:XTH	SEG:seg	:	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase 9 [Source:PGSC_GENE;Acc:PGSC0003DMG402018740]

Coordinates

chr7:+:2608950..2610837

Molecular Weight (calculated)

32583.2 Da

IEP (calculated)

8.095

GRAVY (calculated)

-0.377

Length

285 amino acids

Sequence
(BLAST)

001: MASLVLCLVS FAFCFLHYSL ASNNFNQDFD VTWGDGRAKV LNNGKLLTLS LDKVSGSGVK SKKEYLFGRI DMQLKLVRGN SAGTVTTYYL SSQGSTHDEI
101: DFEFLGNLSG DPYIVHTNVY TQGKGDKEQQ FYLWFDPTAD FHTYSILWNP QTIIFYVDST PIRVFKNMKS SGVPYPNNQP MRVYASLWNA DDWATRGGLI
201: KTNWSNAPFI ASFRNFKDNN ACIWEFRKSS CTNSTKSWFS QELDSTSQAR LQWVQKNYMV YNYCNDINRF PQGIPLECTF NSTTS

Best Arabidopsis Sequence Match ( AT5G57560.1 )
(BLAST)

001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA

Arabidopsis Description

XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.