Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- endoplasmic reticulum 2
- extracellular 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038819.1-P | Field mustard | cytosol, extracellular, nucleus | 67.28 | 92.05 |
| CDY49308 | Canola | extracellular | 86.54 | 90.13 |
| AT2G18800.1 | Thale cress | extracellular | 79.51 | 85.25 |
| CDY66832 | Canola | extracellular | 54.43 | 65.68 |
| CDY14905 | Canola | extracellular | 53.82 | 64.94 |
| KRH19006 | Soybean | vacuole | 58.1 | 64.85 |
| CDY39193 | Canola | extracellular | 53.21 | 63.97 |
| CDY59999 | Canola | extracellular | 48.32 | 63.97 |
| GSMUA_Achr6P30850_001 | Banana | extracellular | 54.74 | 63.48 |
| KRH02889 | Soybean | extracellular | 56.27 | 63.23 |
| PGSC0003DMT400048241 | Potato | extracellular | 54.74 | 62.81 |
| Solyc07g006860.2.1 | Tomato | extracellular | 54.74 | 62.81 |
| CDY28174 | Canola | extracellular | 53.82 | 62.41 |
| GSMUA_Achr10P... | Banana | extracellular | 53.82 | 62.41 |
| CDX72228 | Canola | extracellular | 53.21 | 62.37 |
| CDY67487 | Canola | extracellular | 49.54 | 62.31 |
| CDY25903 | Canola | extracellular | 49.54 | 62.31 |
| CDX68640 | Canola | extracellular | 53.52 | 62.06 |
| CDY67778 | Canola | extracellular | 52.91 | 60.92 |
| CDY25904 | Canola | extracellular | 52.91 | 60.92 |
| CDX89393 | Canola | extracellular | 53.21 | 60.63 |
| CDX72227 | Canola | extracellular | 50.15 | 60.52 |
| CDX94413 | Canola | extracellular | 52.6 | 59.93 |
| GSMUA_Achr10P... | Banana | extracellular | 51.99 | 59.03 |
| CDY03539 | Canola | endoplasmic reticulum, extracellular | 54.74 | 57.37 |
| EER90302 | Sorghum | extracellular | 49.85 | 56.6 |
| CDY11863 | Canola | extracellular | 49.24 | 56.29 |
| Os06t0696600-01 | Rice | extracellular | 49.54 | 56.25 |
| CDY02738 | Canola | extracellular, nucleus, vacuole | 36.7 | 55.81 |
| TraesCS7B01G327400.1 | Wheat | extracellular | 48.62 | 55.79 |
| CDX88627 | Canola | extracellular | 48.62 | 55.59 |
| HORVU7Hr1G098370.1 | Barley | extracellular | 48.32 | 55.44 |
| TraesCS7A01G427300.1 | Wheat | extracellular | 48.32 | 55.44 |
| TraesCS7A01G427100.1 | Wheat | extracellular | 48.32 | 55.44 |
| TraesCS7D01G419400.1 | Wheat | vacuole | 48.62 | 55.4 |
| CDY67488 | Canola | extracellular | 47.71 | 55.12 |
| CDY59998 | Canola | extracellular | 47.71 | 55.12 |
| CDY67779 | Canola | extracellular | 48.01 | 54.9 |
| CDY69806 | Canola | extracellular | 47.4 | 54.58 |
| CDY50186 | Canola | extracellular | 47.4 | 54.2 |
| CDX92733 | Canola | extracellular | 47.09 | 53.85 |
| CDY27126 | Canola | extracellular | 47.4 | 53.63 |
| CDY61576 | Canola | vacuole | 45.87 | 53.57 |
| CDY02741 | Canola | extracellular | 47.4 | 52.72 |
| CDY12366 | Canola | extracellular | 40.98 | 47.18 |
| CDX69621 | Canola | vacuole | 41.28 | 46.08 |
| CDY09832 | Canola | vacuole | 41.28 | 46.08 |
| CDX78542 | Canola | vacuole | 41.28 | 45.3 |
| CDX93096 | Canola | extracellular | 40.67 | 45.08 |
| CDX70524 | Canola | vacuole | 40.98 | 44.97 |
| CDY08756 | Canola | extracellular | 39.14 | 44.91 |
| CDY35228 | Canola | extracellular | 40.06 | 44.86 |
| CDY69237 | Canola | extracellular | 40.37 | 44.75 |
| CDY45623 | Canola | extracellular | 38.84 | 44.56 |
| CDY06861 | Canola | extracellular | 39.45 | 44.18 |
| CDX72656 | Canola | extracellular, vacuole | 38.84 | 43.49 |
| CDY31620 | Canola | extracellular, vacuole | 38.53 | 43.0 |
| CDY22110 | Canola | extracellular | 37.92 | 42.76 |
| CDY21985 | Canola | extracellular | 37.92 | 42.76 |
| CDX90896 | Canola | extracellular | 37.31 | 42.07 |
| Zm00001d014614_P001 | Maize | nucleus, plastid | 48.32 | 41.91 |
| Zm00001d014615_P002 | Maize | extracellular | 48.32 | 41.91 |
| CDY53771 | Canola | extracellular | 37.0 | 41.72 |
| CDX71167 | Canola | vacuole | 36.7 | 40.4 |
| CDY49788 | Canola | extracellular | 35.47 | 38.8 |
| CDX97967 | Canola | extracellular | 35.17 | 38.46 |
Protein Annotations
| KEGG:00500+2.4.1.20 | Gene3D:2.60.120.200 | MapMan:50.2.4 | GO:A0A078FF26 | UniProt:A0A078FF26 | EnsemblPlants:CDY13000 |
| ProteinID:CDY13000 | ProteinID:CDY13000.1 | ncoils:Coil | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 |
| EnsemblPlantsGene:GSBRNA2T00070766001 | InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 |
| PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF101 | SUPFAM:SSF49899 | TMHMM:TMhelix | UniParc:UPI0004EE67E2 |
| InterPro:XET_C | InterPro:XTH | SEG:seg | : | : | : |
Description
BnaC07g02990DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078FF26]
Coordinates
chrLK032030:-:73210..74486
Molecular Weight (calculated)
37259.9 Da
IEP (calculated)
9.274
GRAVY (calculated)
-0.580
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQTQINTSA TYNLKEETSP KWKTKMVSHT LLVMSLILFL GLNTFLVAHA NYLNQNIDIT WGDGRGNFQN NGTLLNLTLD QSSGSGFQSK AEYLYGKVDM
101: QIKLVPGNSA GTVTTFYLKS QGLTWDEIDF EFLGNVSGDP YILHTNVYTQ GKGDREQQFY LWFDPTAEFH NYSILWNPSH IVFYVDGKPI REFKNLEAMG
201: VAYPKSQPMR MYGSLWNADD WATRGGLVKT NWSEGPFVAS FMNYNSENAC VCPGDSSSSS STSTSEWFSQ RGMDSSSRKV LKWVQKKFMV YNYCKDKKRF
301: WQGLPVECDA KKNNKNKNKN KNKNIKS
101: QIKLVPGNSA GTVTTFYLKS QGLTWDEIDF EFLGNVSGDP YILHTNVYTQ GKGDREQQFY LWFDPTAEFH NYSILWNPSH IVFYVDGKPI REFKNLEAMG
201: VAYPKSQPMR MYGSLWNADD WATRGGLVKT NWSEGPFVAS FMNYNSENAC VCPGDSSSSS STSTSEWFSQ RGMDSSSRKV LKWVQKKFMV YNYCKDKKRF
301: WQGLPVECDA KKNNKNKNKN KNKNIKS
001: MVSSTLLVMS ISLFLGLSIL LVVHGKDFNQ DIDITWGDGR GNILNNGTLL NLGLDQSSGS GFQSKAEYLY GKVDMQIKLV PGNSAGTVTT FYLKSQGLTW
101: DEIDFEFLGN VSGDPYIVHT NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK NQPMRMYGSL WNADDWATRG
201: GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN
301: KNTKS
101: DEIDFEFLGN VSGDPYIVHT NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK NQPMRMYGSL WNADDWATRG
201: GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN
301: KNTKS
Arabidopsis Description
XTH21Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VQ29]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.