Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 4
- extracellular 4
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66832 | Canola | extracellular | 86.86 | 100.0 |
| CDY14905 | Canola | extracellular | 85.58 | 98.52 |
| CDY39193 | Canola | extracellular | 79.49 | 91.18 |
| CDX68640 | Canola | extracellular | 80.77 | 89.36 |
| CDY28174 | Canola | extracellular | 80.77 | 89.36 |
| CDX72228 | Canola | extracellular | 79.81 | 89.25 |
| AT4G30270.1 | Thale cress | extracellular | 76.92 | 89.22 |
| CDX72227 | Canola | extracellular | 70.83 | 81.55 |
| CDY59999 | Canola | extracellular | 55.77 | 70.45 |
| CDY67487 | Canola | extracellular | 57.37 | 68.85 |
| CDY25903 | Canola | extracellular | 57.05 | 68.46 |
| CDX89393 | Canola | extracellular | 61.54 | 66.9 |
| CDX94413 | Canola | extracellular | 61.22 | 66.55 |
| KRH19136 | Soybean | nucleus | 58.65 | 64.66 |
| KRH37378 | Soybean | nucleus | 54.81 | 64.29 |
| VIT_11s0052g01220.t01 | Wine grape | extracellular | 57.69 | 63.16 |
| PGSC0003DMT400036329 | Potato | extracellular | 56.41 | 62.41 |
| VIT_11s0052g01250.t01 | Wine grape | extracellular | 57.37 | 61.94 |
| Solyc07g009380.2.1 | Tomato | extracellular, nucleus | 53.85 | 61.09 |
| CDY25904 | Canola | extracellular | 55.45 | 60.92 |
| CDY67778 | Canola | extracellular | 55.13 | 60.56 |
| Solyc05g046290.2.1 | Tomato | extracellular | 55.77 | 60.42 |
| CDY02741 | Canola | extracellular | 55.77 | 59.18 |
| CDY61576 | Canola | vacuole | 51.28 | 57.14 |
| CDY27126 | Canola | extracellular | 52.88 | 57.09 |
| CDY49308 | Canola | extracellular | 57.37 | 57.01 |
| KRH12375 | Soybean | extracellular | 57.05 | 56.33 |
| CDY59998 | Canola | extracellular | 50.64 | 55.83 |
| CDY69806 | Canola | extracellular | 50.32 | 55.28 |
| CDY67779 | Canola | extracellular | 50.64 | 55.24 |
| CDX88627 | Canola | extracellular | 50.64 | 55.24 |
| CDY67488 | Canola | extracellular | 50.0 | 55.12 |
| CDY11863 | Canola | extracellular | 50.32 | 54.9 |
| CDY13000 | Canola | endoplasmic reticulum, extracellular, nucleus | 57.37 | 54.74 |
| CDY02738 | Canola | extracellular, nucleus, vacuole | 37.18 | 53.95 |
| CDY50186 | Canola | extracellular | 49.04 | 53.5 |
| CDX92733 | Canola | extracellular | 48.72 | 53.15 |
| CDY12366 | Canola | extracellular | 45.19 | 49.65 |
| CDX69621 | Canola | vacuole | 45.19 | 48.12 |
| CDY09832 | Canola | vacuole | 45.19 | 48.12 |
| CDX78542 | Canola | vacuole | 45.83 | 47.99 |
| CDX70524 | Canola | vacuole | 45.19 | 47.32 |
| CDX93096 | Canola | extracellular | 43.91 | 46.44 |
| CDY69237 | Canola | extracellular | 43.59 | 46.1 |
| CDY45623 | Canola | extracellular | 40.71 | 44.56 |
| CDY08756 | Canola | extracellular | 40.71 | 44.56 |
| CDY53771 | Canola | extracellular | 41.03 | 44.14 |
| CDX90896 | Canola | extracellular | 41.03 | 44.14 |
| CDY22110 | Canola | extracellular | 41.03 | 44.14 |
| CDY21985 | Canola | extracellular | 41.03 | 44.14 |
| CDY35228 | Canola | extracellular | 40.71 | 43.49 |
| CDY06861 | Canola | extracellular | 40.38 | 43.15 |
| CDX72656 | Canola | extracellular, vacuole | 39.74 | 42.47 |
| CDY31620 | Canola | extracellular, vacuole | 39.42 | 41.98 |
| CDY49788 | Canola | extracellular | 38.78 | 40.47 |
| CDX97967 | Canola | extracellular | 38.46 | 40.13 |
| CDX71167 | Canola | vacuole | 37.18 | 39.06 |
Protein Annotations
| KEGG:00500+2.4.1.20 | Gene3D:2.60.120.200 | MapMan:50.2.4 | GO:A0A078ESB6 | InterPro:Beta_glucanase | EnsemblPlants:CDY03539 |
| ProteinID:CDY03539 | ProteinID:CDY03539.1 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0030312 | GO:GO:0042546 |
| GO:GO:0048046 | GO:GO:0071555 | EnsemblPlantsGene:GSBRNA2T00116244001 | InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 |
| PIRSF:PIRSF005604 | PRINTS:PR00737 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF20 |
| SUPFAM:SSF49899 | TMHMM:TMhelix | UniParc:UPI0004EE8EC2 | InterPro:XET_C | InterPro:XTH | SEG:seg |
Description
BnaC03g67980D
Coordinates
chrLK031944:+:78739..80488
Molecular Weight (calculated)
35863.4 Da
IEP (calculated)
9.090
GRAVY (calculated)
-0.342
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTHSLLIYF IKYSYYYFSS HYIYTCLPSY LFLTFLTKHK DMSSFKIFFF SALLAAVFSA SAADFNSDVN VAWGNGRGKI LNNGQLLTLT LDKSSGSGFQ
101: SKAEYLFGKI DMQIKLVPGN SAGTVTTFYL KSEGSTWDEI DFEFLGNMSG DPYTLHTNVY TQGKGDKEQQ FHLWFDPAAN FHTYSILWNP QRIIWTVDNT
201: PIREFKNSEP LGVLFPKSKP MRMYASLWNA DDWATRGGLV KTDWSKAPFV ASYRHIKCDG STRPTSNWYT QQMDSTSQAR LRWVQKNYMI YNYCTDSKRF
301: PQGIPRECAT SA
101: SKAEYLFGKI DMQIKLVPGN SAGTVTTFYL KSEGSTWDEI DFEFLGNMSG DPYTLHTNVY TQGKGDKEQQ FHLWFDPAAN FHTYSILWNP QRIIWTVDNT
201: PIREFKNSEP LGVLFPKSKP MRMYASLWNA DDWATRGGLV KTDWSKAPFV ASYRHIKCDG STRPTSNWYT QQMDSTSQAR LRWVQKNYMI YNYCTDSKRF
301: PQGIPRECAT SA
001: MSPFKIFFFT TLLVAAFSVS AADFNTDVNV AWGNGRGKIL NNGQLLTLSL DKSSGSGFQS KTEYLFGKID MQIKLVPGNS AGTVTTFYLK SEGSTWDEID
101: FEFLGNMSGD PYTLHTNVYT QGKGDKEQQF HLWFDPTANF HTYSILWNPQ RIILTVDDTP IREFKNYESL GVLFPKNKPM RMYASLWNAD DWATRGGLVK
201: TDWSKAPFMA SYRNIKIDSK PNSNWYTQEM DSTSQARLKW VQKNYMIYNY CTDHRRFPQG APKECTTSS
101: FEFLGNMSGD PYTLHTNVYT QGKGDKEQQF HLWFDPTANF HTYSILWNPQ RIILTVDDTP IREFKNYESL GVLFPKNKPM RMYASLWNAD DWATRGGLVK
201: TDWSKAPFMA SYRNIKIDSK PNSNWYTQEM DSTSQARLKW VQKNYMIYNY CTDHRRFPQG APKECTTSS
Arabidopsis Description
XTH24Xyloglucan endotransglucosylase/hydrolase protein 24 [Source:UniProtKB/Swiss-Prot;Acc:P24806]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.