Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024089.1-P | Field mustard | extracellular | 99.63 | 97.13 |
| CDX72228 | Canola | extracellular | 98.16 | 95.7 |
| CDY66832 | Canola | extracellular | 91.18 | 91.51 |
| CDY14905 | Canola | extracellular | 90.44 | 90.77 |
| AT4G30270.1 | Thale cress | extracellular | 88.6 | 89.59 |
| CDY28174 | Canola | extracellular | 91.18 | 87.94 |
| CDX68640 | Canola | extracellular | 90.44 | 87.23 |
| CDX72227 | Canola | extracellular | 84.56 | 84.87 |
| CDY03539 | Canola | endoplasmic reticulum, extracellular | 91.18 | 79.49 |
| CDY59999 | Canola | extracellular | 65.44 | 72.06 |
| CDY25903 | Canola | extracellular | 67.28 | 70.38 |
| CDY67487 | Canola | extracellular | 67.28 | 70.38 |
| CDX89393 | Canola | extracellular | 72.79 | 68.99 |
| CDX94413 | Canola | extracellular | 72.43 | 68.64 |
| KRH37378 | Soybean | nucleus | 63.97 | 65.41 |
| KRH19136 | Soybean | nucleus | 68.01 | 65.37 |
| VIT_11s0052g01220.t01 | Wine grape | extracellular | 67.28 | 64.21 |
| PGSC0003DMT400036329 | Potato | extracellular | 65.81 | 63.48 |
| VIT_11s0052g01250.t01 | Wine grape | extracellular | 66.91 | 62.98 |
| Solyc07g009380.2.1 | Tomato | extracellular, nucleus | 62.87 | 62.18 |
| CDY25904 | Canola | extracellular | 63.97 | 61.27 |
| CDY67778 | Canola | extracellular | 63.6 | 60.92 |
| Solyc05g046290.2.1 | Tomato | extracellular | 64.34 | 60.76 |
| CDY02741 | Canola | extracellular | 65.44 | 60.54 |
| CDY27126 | Canola | extracellular | 61.76 | 58.13 |
| CDY61576 | Canola | vacuole | 59.56 | 57.86 |
| KRH12375 | Soybean | extracellular | 65.44 | 56.33 |
| CDY67779 | Canola | extracellular | 59.19 | 56.29 |
| CDY02738 | Canola | extracellular, nucleus, vacuole | 44.49 | 56.28 |
| CDY59998 | Canola | extracellular | 58.46 | 56.18 |
| CDX88627 | Canola | extracellular | 58.82 | 55.94 |
| CDY67488 | Canola | extracellular | 58.09 | 55.83 |
| CDY49308 | Canola | extracellular | 64.34 | 55.73 |
| CDY11863 | Canola | extracellular | 58.46 | 55.59 |
| CDY69806 | Canola | extracellular | 57.72 | 55.28 |
| CDY50186 | Canola | extracellular | 56.25 | 53.5 |
| CDY13000 | Canola | endoplasmic reticulum, extracellular, nucleus | 63.97 | 53.21 |
| CDX92733 | Canola | extracellular | 55.88 | 53.15 |
| CDY12366 | Canola | extracellular | 52.94 | 50.7 |
| CDX78542 | Canola | vacuole | 52.57 | 47.99 |
| CDY09832 | Canola | vacuole | 51.47 | 47.78 |
| CDX69621 | Canola | vacuole | 51.47 | 47.78 |
| CDX70524 | Canola | vacuole | 52.21 | 47.65 |
| CDX93096 | Canola | extracellular | 49.63 | 45.76 |
| CDY69237 | Canola | extracellular | 49.26 | 45.42 |
| CDY45623 | Canola | extracellular | 47.43 | 45.26 |
| CDY08756 | Canola | extracellular | 47.43 | 45.26 |
| CDX90896 | Canola | extracellular | 47.43 | 44.48 |
| CDY21985 | Canola | extracellular | 47.43 | 44.48 |
| CDY22110 | Canola | extracellular | 47.43 | 44.48 |
| CDY53771 | Canola | extracellular | 47.43 | 44.48 |
| CDY35228 | Canola | extracellular | 46.69 | 43.49 |
| CDY06861 | Canola | extracellular | 46.32 | 43.15 |
| CDX72656 | Canola | extracellular, vacuole | 45.96 | 42.81 |
| CDY31620 | Canola | extracellular, vacuole | 45.59 | 42.32 |
| CDY49788 | Canola | extracellular | 45.22 | 41.14 |
| CDX97967 | Canola | extracellular | 44.85 | 40.8 |
| CDX71167 | Canola | vacuole | 42.65 | 39.06 |
Protein Annotations
| KEGG:00500+2.4.1.20 | Gene3D:2.60.120.200 | MapMan:50.2.4 | GO:A0A078HQZ7 | UniProt:A0A078HQZ7 | EnsemblPlants:CDY39193 |
| ProteinID:CDY39193 | ProteinID:CDY39193.1 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 |
| GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | EnsemblPlantsGene:GSBRNA2T00067401001 | InterPro:IPR000757 | PFAM:PF00722 |
| PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF20 |
| SUPFAM:SSF49899 | SignalP:SignalP-noTM | UniParc:UPI0004EDB619 | InterPro:XET_C | InterPro:XTH | SEG:seg |
Description
BnaA03g50050DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078HQZ7]
Coordinates
chrLK032443:-:20497..21916
Molecular Weight (calculated)
30785.3 Da
IEP (calculated)
8.970
GRAVY (calculated)
-0.370
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPFKIFFFA ALLAAVFSFS AADFNSDVNV AWGNGRGKIL NNGQLLTLSL DRSSGSGFQS KTEYLFGKID MQIKLVPGNS AGTVTTFYLK SEGSTWDEID
101: FEFLGNMSGD PYTLHTNVYT QGKGDKEQQF YLWFDPTANF HTYSILWNPQ RIILTVDGTP IREFKNSESI GVLFPKSKPM RMYASLWNAD DWATRGGLVK
201: TDWSKAPFMA SYRSIKIEGS SCSPSSSWYT QQMDATSQAR LRWVQKNYMI YNYCTDRKRF PQGIPRECAP SA
101: FEFLGNMSGD PYTLHTNVYT QGKGDKEQQF YLWFDPTANF HTYSILWNPQ RIILTVDGTP IREFKNSESI GVLFPKSKPM RMYASLWNAD DWATRGGLVK
201: TDWSKAPFMA SYRSIKIEGS SCSPSSSWYT QQMDATSQAR LRWVQKNYMI YNYCTDRKRF PQGIPRECAP SA
001: MSPFKIFFFT TLLVAAFSVS AADFNTDVNV AWGNGRGKIL NNGQLLTLSL DKSSGSGFQS KTEYLFGKID MQIKLVPGNS AGTVTTFYLK SEGSTWDEID
101: FEFLGNMSGD PYTLHTNVYT QGKGDKEQQF HLWFDPTANF HTYSILWNPQ RIILTVDDTP IREFKNYESL GVLFPKNKPM RMYASLWNAD DWATRGGLVK
201: TDWSKAPFMA SYRNIKIDSK PNSNWYTQEM DSTSQARLKW VQKNYMIYNY CTDHRRFPQG APKECTTSS
101: FEFLGNMSGD PYTLHTNVYT QGKGDKEQQF HLWFDPTANF HTYSILWNPQ RIILTVDDTP IREFKNYESL GVLFPKNKPM RMYASLWNAD DWATRGGLVK
201: TDWSKAPFMA SYRNIKIDSK PNSNWYTQEM DSTSQARLKW VQKNYMIYNY CTDHRRFPQG APKECTTSS
Arabidopsis Description
XTH24Xyloglucan endotransglucosylase/hydrolase protein 24 [Source:UniProtKB/Swiss-Prot;Acc:P24806]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.