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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008806.1-P Field mustard extracellular 98.61 98.61
CDX89393 Canola extracellular 98.26 98.26
AT4G25810.1 Thale cress extracellular 91.64 91.96
CDY25903 Canola extracellular 77.0 85.0
CDY67487 Canola extracellular 75.96 83.85
CDY59999 Canola extracellular 72.13 83.81
KRH19136 Soybean nucleus 71.43 72.44
CDY39193 Canola extracellular 68.64 72.43
VIT_11s0052g01220.t01 Wine grape extracellular 71.08 71.58
CDY28174 Canola extracellular 70.03 71.28
CDX68640 Canola extracellular 70.03 71.28
CDY02741 Canola extracellular 72.82 71.09
KRH37378 Soybean nucleus 65.51 70.68
CDX72228 Canola extracellular 68.64 70.61
CDY14905 Canola extracellular 66.55 70.48
CDY66832 Canola extracellular 66.2 70.11
PGSC0003DMT400036329 Potato extracellular 66.9 68.09
CDX72227 Canola extracellular 62.72 66.42
Solyc05g046290.2.1 Tomato extracellular 66.2 65.97
VIT_11s0052g01250.t01 Wine grape extracellular 66.2 65.74
Solyc07g009380.2.1 Tomato extracellular, nucleus 62.02 64.73
CDY25904 Canola extracellular 63.76 64.44
CDY67778 Canola extracellular 63.41 64.08
CDY02738 Canola extracellular, nucleus, vacuole 45.99 61.4
CDY03539 Canola endoplasmic reticulum, extracellular 66.55 61.22
KRH12375 Soybean extracellular 66.55 60.44
CDY67488 Canola extracellular 59.58 60.42
CDY27126 Canola extracellular 60.63 60.21
CDY59998 Canola extracellular 59.23 60.07
CDY67779 Canola extracellular 59.58 59.79
CDY11863 Canola extracellular 59.58 59.79
CDY61576 Canola vacuole 58.19 59.64
CDY69806 Canola extracellular 58.88 59.51
CDX88627 Canola extracellular 58.88 59.09
CDY50186 Canola extracellular 56.79 56.99
CDX92733 Canola extracellular 56.45 56.64
CDY49308 Canola extracellular 60.63 55.41
CDY13000 Canola endoplasmic reticulum, extracellular, nucleus 59.93 52.6
CDY12366 Canola extracellular 49.83 50.35
CDX69621 Canola vacuole 51.22 50.17
CDY09832 Canola vacuole 51.22 50.17
CDX78542 Canola vacuole 51.22 49.33
CDX70524 Canola vacuole 50.87 48.99
CDX93096 Canola extracellular 48.43 47.12
CDY69237 Canola extracellular 48.08 46.78
CDY08756 Canola extracellular 46.34 46.67
CDY45623 Canola extracellular 46.34 46.67
CDY53771 Canola extracellular 47.04 46.55
CDY21985 Canola extracellular 47.04 46.55
CDY35228 Canola extracellular 47.04 46.23
CDY06861 Canola extracellular 47.04 46.23
CDY22110 Canola extracellular 46.69 46.21
CDX90896 Canola extracellular 46.69 46.21
CDX72656 Canola extracellular, vacuole 46.34 45.55
CDY31620 Canola extracellular, vacuole 45.99 45.05
CDY49788 Canola extracellular 45.3 43.48
CDX97967 Canola extracellular 44.6 42.81
CDX71167 Canola vacuole 41.81 40.4
Protein Annotations
KEGG:00500+2.4.1.20Gene3D:2.60.120.200MapMan:50.2.4GO:A0A078E4Q5EnsemblPlants:CDX94413ProteinID:CDX94413
ProteinID:CDX94413.1InterPro:ConA-like_dom_sfInterPro:GH16InterPro:GH16_ASGO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623GO:GO:0005975
GO:GO:0006073GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010411GO:GO:0016043
GO:GO:0016740GO:GO:0016762GO:GO:0016787GO:GO:0030312GO:GO:0042546GO:GO:0048046
GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00157553001InterPro:IPR000757PFAM:PF00722PFAM:PF06955PIRSF:PIRSF005604
ScanProsite:PS01034PFscan:PS51762PANTHER:PTHR31062PANTHER:PTHR31062:SF20SUPFAM:SSF49899SignalP:SignalP-noTM
UniParc:UPI0004EF45D6InterPro:XET_CInterPro:XTHSEG:seg::
Description
BnaC01g17710D
Coordinates
chrLK031881:-:1014349..1015724
Molecular Weight (calculated)
32123.5 Da
IEP (calculated)
4.814
GRAVY (calculated)
-0.411
Length
287 amino acids
Sequence
(BLAST)
001: MAMINYSTIL FPLLAAIMIY SVSANFHQDV EITWGDGRGQ ITNNGDLLTL SLDKSSGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTI DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEDWATRGGL
201: VKTDWSKAPF TASYRGFSEE ACVVSNGKSS CSNGSGQGSG SGSWLSQELD STGQERMRWV QSNYVIYNYC TDAERFPQGL PRECLSA
Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)
001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
Arabidopsis Description
XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.