CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020432.1-P	Field mustard	extracellular	99.65	99.65
VIT_11s0052g01230.t01	Wine grape	cytosol	60.42	61.51
CDX89393	Canola	extracellular	60.42	59.58
CDX94413	Canola	extracellular	60.07	59.23
CDX68640	Canola	extracellular	58.66	58.87
CDY14905	Canola	extracellular	56.18	58.67
CDY28174	Canola	extracellular	58.3	58.51
CDY39193	Canola	extracellular	56.18	58.46
CDY66832	Canola	extracellular	55.83	58.3
CDY59999	Canola	extracellular	50.88	58.3
CDX72228	Canola	extracellular	56.89	57.71
CDY25903	Canola	extracellular	52.65	57.31
CDX72227	Canola	extracellular	54.77	57.2
CDY67778	Canola	extracellular	57.24	57.04
CDY25904	Canola	extracellular	57.24	57.04
CDY67487	Canola	extracellular	52.3	56.92
CDY02738	Canola	extracellular, nucleus, vacuole	42.4	55.81
CDY67488	Canola	extracellular	55.12	55.12
CDY67779	Canola	extracellular	55.48	54.9
CDY69806	Canola	extracellular	54.42	54.23
CDY50186	Canola	extracellular	54.77	54.2
CDY11863	Canola	extracellular	54.77	54.2
CDX92733	Canola	extracellular	54.42	53.85
CDX88627	Canola	extracellular	54.42	53.85
CDY49308	Canola	extracellular	57.6	51.91
CDY61576	Canola	vacuole	51.24	51.79
CDY27126	Canola	extracellular	52.3	51.21
CDY03539	Canola	endoplasmic reticulum, extracellular	55.83	50.64
CDY02741	Canola	extracellular	51.59	49.66
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	55.12	47.71
CDY08756	Canola	extracellular	46.64	46.32
CDY45623	Canola	extracellular	46.64	46.32
CDX69621	Canola	vacuole	47.35	45.73
CDY09832	Canola	vacuole	47.35	45.73
CDY35228	Canola	extracellular	45.94	44.52
CDY06861	Canola	extracellular	45.94	44.52
CDX78542	Canola	vacuole	46.64	44.3
CDX72656	Canola	extracellular, vacuole	45.58	44.18
CDX70524	Canola	vacuole	46.29	43.96
CDY31620	Canola	extracellular, vacuole	45.23	43.69
CDY53771	Canola	extracellular	44.17	43.1
CDX93096	Canola	extracellular	44.88	43.05
CDY21985	Canola	extracellular	43.82	42.76
CDX90896	Canola	extracellular	43.82	42.76
CDY22110	Canola	extracellular	43.82	42.76
CDY69237	Canola	extracellular	44.52	42.71
CDY12366	Canola	extracellular	42.4	42.25
CDX71167	Canola	vacuole	43.82	41.75
CDY49788	Canola	extracellular	42.76	40.47
CDX97967	Canola	extracellular	42.76	40.47

Protein Annotations

KEGG:00500+2.4.1.20	Gene3D:2.60.120.200	MapMan:50.2.4	GO:A0A078J8D6	UniProt:A0A078J8D6	EnsemblPlants:CDY59998
ProteinID:CDY59998	ProteinID:CDY59998.1	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSBRNA2T00028018001	InterPro:IPR000757	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF20
SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0004EDFE6B	InterPro:XET_C	InterPro:XTH	SEG:seg

Description

BnaA02g35320DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078J8D6]

Coordinates

chrLK033830:-:16669..17696

Molecular Weight (calculated)

31733.5 Da

IEP (calculated)

6.755

GRAVY (calculated)

-0.310

Length

283 amino acids

Sequence
(BLAST)

001: MGCSPILISL SILSCSALIL AGDFRKDIDI VWGSDKAKIL ENGQAITLSL DKASGSGFES KAQFLFGKVS MELKLVPGNS AGTVTSYYLA SKGTMWDEID
101: FEFLGNLSGD PYTVHTNVIT QGKGDREQQF RLWFDPTVDF HTYSILWNPK TIVFYVDGTP IREFKKMNTK NVAYPEKQAM RVHSSLWNGD DWATRGGLVK
201: TDWSKAPFTA YYRNFEVQDC DWSAPGSNVS CGGGGPNSWL NEGIDENSRK RLKWVQSNFI IYNYCNDAKR FRLGLPTECV VMN

Best Arabidopsis Sequence Match ( AT2G18800.1 )
(BLAST)

001: MVSSTLLVMS ISLFLGLSIL LVVHGKDFNQ DIDITWGDGR GNILNNGTLL NLGLDQSSGS GFQSKAEYLY GKVDMQIKLV PGNSAGTVTT FYLKSQGLTW
101: DEIDFEFLGN VSGDPYIVHT NVYTQGKGDR EQQFYLWFDP TAAFHNYSIL WNPSHIVFYI DGKPIREFKN LEVLGVAYPK NQPMRMYGSL WNADDWATRG
201: GLVKTNWSQG PFVASFMNYN SENACVWSIV NGTTTTSPCS PGDSTSSSSS STSEWFSQRG MDSSSKKVLR WVQRKFMVYN YCKDKKRFSN GLPVECTAKN
301: KNTKS

Arabidopsis Description

XTH21Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VQ29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.