Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P02240_001 | Banana | cytosol, mitochondrion, nucleus | 52.88 | 76.17 |
| VIT_11s0052g01330.t01 | Wine grape | extracellular, vacuole | 69.42 | 73.66 |
| GSMUA_Achr10P... | Banana | cytosol | 52.16 | 72.86 |
| VIT_11s0052g01220.t01 | Wine grape | extracellular | 74.46 | 72.63 |
| GSMUA_Achr3P05220_001 | Banana | cytosol | 53.96 | 72.12 |
| VIT_11s0052g01300.t01 | Wine grape | extracellular | 75.18 | 70.61 |
| VIT_11s0052g01280.t01 | Wine grape | endoplasmic reticulum, extracellular | 75.18 | 70.61 |
| VIT_11s0052g01200.t01 | Wine grape | extracellular | 75.18 | 70.37 |
| VIT_11s0052g01320.t01 | Wine grape | extracellular | 74.82 | 70.27 |
| VIT_11s0052g01260.t01 | Wine grape | endoplasmic reticulum, extracellular | 74.82 | 70.27 |
| GSMUA_Achr5P21880_001 | Banana | cytosol | 53.6 | 69.95 |
| GSMUA_Achr9P13820_001 | Banana | cytosol | 52.52 | 69.86 |
| VIT_11s0052g01270.t01 | Wine grape | extracellular | 74.1 | 69.36 |
| GSMUA_Achr7P16430_001 | Banana | cytosol | 52.88 | 69.01 |
| VIT_05s0062g00610.t01 | Wine grape | cytosol | 65.11 | 68.3 |
| VIT_05s0062g00480.t01 | Wine grape | cytosol | 65.11 | 68.3 |
| VIT_11s0052g01310.t01 | Wine grape | extracellular | 65.47 | 67.66 |
| VIT_11s0052g01340.t01 | Wine grape | extracellular | 66.19 | 67.65 |
| VIT_11s0052g01250.t01 | Wine grape | extracellular | 70.14 | 67.47 |
| GSMUA_Achr3P05200_001 | Banana | cytosol, plastid, vacuole | 47.12 | 66.5 |
| VIT_10s0003g02440.t01 | Wine grape | extracellular | 65.11 | 66.3 |
| AT5G57550.1 | Thale cress | extracellular | 67.27 | 65.85 |
| VIT_05s0062g00250.t01 | Wine grape | extracellular | 65.47 | 65.23 |
| VIT_11s0052g01180.t01 | Wine grape | cytosol | 74.82 | 64.8 |
| TraesCS7D01G418700.1 | Wheat | cytosol, mitochondrion, nucleus | 51.8 | 64.57 |
| VIT_05s0062g00240.t01 | Wine grape | extracellular | 64.75 | 64.06 |
| PGSC0003DMT400048242 | Potato | extracellular | 63.67 | 63.44 |
| Solyc07g006870.2.1 | Tomato | extracellular, vacuole | 64.03 | 63.12 |
| TraesCS7D01G419300.1 | Wheat | extracellular | 64.75 | 62.07 |
| HORVU7Hr1G098320.3 | Barley | vacuole | 64.39 | 61.94 |
| TraesCS7A01G426100.1 | Wheat | vacuole | 64.39 | 61.94 |
| TraesCS7A01G427000.1 | Wheat | extracellular | 63.67 | 61.89 |
| TraesCS7B01G326900.1 | Wheat | extracellular | 64.03 | 61.59 |
| TraesCS7D01G419200.1 | Wheat | extracellular | 63.31 | 61.54 |
| HORVU0Hr1G022110.1 | Barley | extracellular, vacuole | 64.39 | 61.3 |
| TraesCS7B01G327200.1 | Wheat | extracellular | 62.95 | 61.19 |
| TraesCS7A01G426900.1 | Wheat | extracellular | 62.95 | 61.19 |
| TraesCS7D01G419100.1 | Wheat | extracellular | 63.31 | 61.11 |
| TraesCS7A01G426600.1 | Wheat | vacuole | 63.67 | 61.03 |
| TraesCS7B01G327000.1 | Wheat | extracellular | 63.67 | 60.62 |
| CDY59998 | Canola | extracellular | 61.51 | 60.42 |
| Bra020432.1-P | Field mustard | extracellular | 61.51 | 60.42 |
| Os06t0697000-02 | Rice | extracellular | 62.95 | 60.34 |
| TraesCS7A01G426700.1 | Wheat | extracellular | 62.59 | 60.21 |
| HORVU7Hr1G098260.1 | Barley | vacuole | 62.95 | 59.93 |
| AT4G25820.1 | Thale cress | extracellular | 61.51 | 59.58 |
| EER90303 | Sorghum | extracellular, golgi, vacuole | 64.03 | 59.14 |
| Zm00001d014617_P001 | Maize | extracellular | 63.31 | 59.06 |
| AT5G57530.1 | Thale cress | extracellular | 60.43 | 58.95 |
| AT5G57540.1 | Thale cress | extracellular | 58.99 | 57.75 |
| VIT_11s0052g01190.t01 | Wine grape | vacuole | 75.9 | 57.18 |
| EER88885 | Sorghum | extracellular | 59.71 | 56.85 |
| HORVU7Hr1G098440.2 | Barley | extracellular | 58.27 | 56.64 |
| TraesCS7A01G427600.1 | Wheat | extracellular | 58.27 | 56.06 |
| Os06t0696400-01 | Rice | extracellular | 58.99 | 55.97 |
| Zm00001d014613_P001 | Maize | plasma membrane | 58.27 | 55.86 |
| TraesCS7D01G418600.1 | Wheat | vacuole | 64.03 | 55.8 |
| TraesCS7D01G419900.1 | Wheat | extracellular | 57.55 | 55.75 |
| TraesCS7B01G327700.1 | Wheat | extracellular | 57.55 | 55.17 |
| Zm00001d009309_P001 | Maize | extracellular, vacuole | 52.16 | 52.35 |
| VIT_17s0053g00610.t01 | Wine grape | cytosol | 39.21 | 50.46 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 51.8 | 49.48 |
| Solyc07g006850.1.1 | Tomato | golgi | 60.43 | 49.12 |
| PGSC0003DMT400048240 | Potato | golgi | 60.07 | 48.83 |
| VIT_01s0150g00460.t01 | Wine grape | extracellular | 50.36 | 45.6 |
| VIT_12s0134g00160.t01 | Wine grape | extracellular | 47.48 | 44.59 |
| HORVU7Hr1G098280.1 | Barley | extracellular, mitochondrion, vacuole | 64.03 | 44.5 |
| VIT_10s0116g00520.t01 | Wine grape | extracellular, vacuole | 44.96 | 41.67 |
| VIT_03s0088g00650.t01 | Wine grape | extracellular, vacuole | 42.45 | 40.0 |
| VIT_11s0052g01210.t01 | Wine grape | extracellular, plastid | 66.55 | 11.69 |
Protein Annotations
| EntrezGene:100261550 | wikigene:100261550 | Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:Beta_glucanase | ProteinID:CCB44631 |
| ProteinID:CCB44631.1 | InterPro:ConA-like_dom_sf | UniProt:F6GXE5 | EMBL:FN594964 | InterPro:GH16 | InterPro:GH16_AS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | EntrezGene:LOC100261550 |
| wikigene:LOC100261550 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | PRINTS:PR00737 | ScanProsite:PS01034 |
| PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF20 | SUPFAM:SSF49899 | TIGR:TC52577 | UniParc:UPI000210897C |
| ArrayExpress:VIT_11s0052g01230 | EnsemblPlantsGene:VIT_11s0052g01230 | EnsemblPlants:VIT_11s0052g01230.t01 | unigene:Vvi.11540 | InterPro:XET_C | RefSeq:XP_002274154 |
| RefSeq:XP_002274154.1 | InterPro:XTH | SEG:seg | : | : | : |
Description
Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6GXE5]
Coordinates
chr11:-:18958892..18961500
Molecular Weight (calculated)
31189.3 Da
IEP (calculated)
4.948
GRAVY (calculated)
-0.405
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASFIAVSA GTLYEDIDIK WGDDRAKILN NGQLLTLSLD RTCGAGFQSK NEYLFGKIEM QLKLVPGNSA GTVTAFYLSS PGPTRDEIDF EFLGNLSGDP
101: YTVHTNVYTQ GKGEREQQFH LWFDPTADFH TYSFTWNPKH IIFSVDDTPI REFKNLESIG VQYPKNQAMS LYSSLWDAED WATRGGLVKT DWSQAPFTAS
201: YRNFNANGCI WSAGKSSCSS VSSSLILADN SWLAPELDAR SQEKLMWVQR NYMIYNYCTD TKRFPGGFPA ECHATSNS
101: YTVHTNVYTQ GKGEREQQFH LWFDPTADFH TYSFTWNPKH IIFSVDDTPI REFKNLESIG VQYPKNQAMS LYSSLWDAED WATRGGLVKT DWSQAPFTAS
201: YRNFNANGCI WSAGKSSCSS VSSSLILADN SWLAPELDAR SQEKLMWVQR NYMIYNYCTD TKRFPGGFPA ECHATSNS
001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
Arabidopsis Description
XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.