Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_11s0052g01320.t01 | Wine grape | extracellular | 95.61 | 95.61 |
VIT_11s0052g01280.t01 | Wine grape | endoplasmic reticulum, extracellular | 95.61 | 95.61 |
VIT_11s0052g01260.t01 | Wine grape | endoplasmic reticulum, extracellular | 95.27 | 95.27 |
VIT_11s0052g01330.t01 | Wine grape | extracellular, vacuole | 79.73 | 90.08 |
VIT_11s0052g01200.t01 | Wine grape | extracellular | 89.19 | 88.89 |
VIT_11s0052g01220.t01 | Wine grape | extracellular | 83.11 | 86.32 |
VIT_11s0052g01270.t01 | Wine grape | extracellular | 84.46 | 84.18 |
VIT_11s0052g01340.t01 | Wine grape | extracellular | 75.68 | 82.35 |
VIT_11s0052g01250.t01 | Wine grape | extracellular | 77.36 | 79.24 |
Solyc03g093080.2.1 | Tomato | extracellular | 75.68 | 78.32 |
PGSC0003DMT400038413 | Potato | extracellular | 75.68 | 78.32 |
Solyc03g093120.2.1 | Tomato | extracellular | 75.34 | 77.97 |
VIT_11s0052g01180.t01 | Wine grape | cytosol | 84.46 | 77.88 |
VIT_11s0052g01310.t01 | Wine grape | extracellular | 70.61 | 77.7 |
Solyc03g093130.2.1 | Tomato | extracellular | 75.0 | 77.35 |
Solyc03g093110.2.1 | Tomato | extracellular | 74.66 | 77.0 |
VIT_05s0062g00250.t01 | Wine grape | extracellular | 71.62 | 75.99 |
VIT_05s0062g00610.t01 | Wine grape | cytosol | 67.57 | 75.47 |
VIT_05s0062g00480.t01 | Wine grape | cytosol | 67.57 | 75.47 |
VIT_10s0003g02440.t01 | Wine grape | extracellular | 69.59 | 75.46 |
VIT_11s0052g01230.t01 | Wine grape | cytosol | 70.61 | 75.18 |
VIT_11s0052g01190.t01 | Wine grape | vacuole | 92.91 | 74.53 |
VIT_05s0062g00240.t01 | Wine grape | extracellular | 69.26 | 72.95 |
VIT_11s0016g03480.t01 | Wine grape | extracellular | 51.35 | 52.23 |
VIT_17s0053g00610.t01 | Wine grape | cytosol | 37.84 | 51.85 |
VIT_01s0150g00460.t01 | Wine grape | extracellular | 52.36 | 50.49 |
VIT_03s0088g00650.t01 | Wine grape | extracellular, vacuole | 46.28 | 46.44 |
VIT_12s0134g00160.t01 | Wine grape | extracellular | 45.27 | 45.27 |
VIT_10s0116g00520.t01 | Wine grape | extracellular, vacuole | 43.92 | 43.33 |
VIT_11s0052g01210.t01 | Wine grape | extracellular, plastid | 71.96 | 13.46 |
Protein Annotations
EntrezGene:100263324 | wikigene:100263324 | Gene3D:2.60.120.200 | MapMan:50.2.4 | UniProt:A5C3A3 | EMBL:AM480655 |
InterPro:Beta_glucanase | ProteinID:CAN77531 | ProteinID:CAN77531.1 | ProteinID:CCB44624 | ProteinID:CCB44624.1 | InterPro:ConA-like_dom_sf |
EMBL:FN594964 | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0006073 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 | GO:GO:0016740 |
GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 |
GO:GO:0071555 | InterPro:IPR000757 | EntrezGene:LOC100263324 | wikigene:LOC100263324 | PFAM:PF00722 | PFAM:PF06955 |
PIRSF:PIRSF005604 | PRINTS:PR00737 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF100 |
SUPFAM:SSF49899 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00015222DD | ArrayExpress:VIT_11s0052g01300 | EnsemblPlantsGene:VIT_11s0052g01300 |
EnsemblPlants:VIT_11s0052g01300.t01 | unigene:Vvi.16824 | InterPro:XET_C | RefSeq:XP_002274827 | RefSeq:XP_002274827.1 | InterPro:XTH |
SEG:seg | : | : | : | : | : |
Description
Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A5C3A3]
Coordinates
chr11:+:19004251..19005363
Molecular Weight (calculated)
33042.4 Da
IEP (calculated)
5.295
GRAVY (calculated)
-0.420
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MTYPTTSNLS PKLLLLSLLL GSFVVASVGN LYQDFDITWG DGRAKILNNG QLLTLSLDKA SGSGFRSNNE YLFGKIDMQL KLVPGNSAGT VTAYYLSSQG
101: PTHDEIDFEF LGNLSGDPYI LHTNVFSQGK GNREQQFYLW FDPTADFHTY SVLWNPQRII FSVDGTPIRE FKNSESIGVP YPKNQPMRIY SSLWNADDWA
201: TRGGLVKTDW SQAPFTASYR NFNANACVWS SGSSSCSSTS PSSTSTNGGW YSQELDSTSQ ERMTWVQKNY MIYNYCTDTK RFPQGLPPEC TATTMS
101: PTHDEIDFEF LGNLSGDPYI LHTNVFSQGK GNREQQFYLW FDPTADFHTY SVLWNPQRII FSVDGTPIRE FKNSESIGVP YPKNQPMRIY SSLWNADDWA
201: TRGGLVKTDW SQAPFTASYR NFNANACVWS SGSSSCSSTS PSSTSTNGGW YSQELDSTSQ ERMTWVQKNY MIYNYCTDTK RFPQGLPPEC TATTMS
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.