Factsheet for VIT_10s0116g00520.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91233	Soybean	extracellular	81.67	81.4
KRH35587	Soybean	extracellular	81.0	80.46
Solyc10g005350.2.1	Tomato	extracellular	72.33	75.35
Solyc03g031800.2.1	Tomato	extracellular	74.0	75.25
CDY49788	Canola	extracellular	75.0	75.25
Bra019846.1-P	Field mustard	extracellular	74.67	74.92
CDX97967	Canola	extracellular	74.67	74.92
PGSC0003DMT400061841	Potato	extracellular	73.33	74.58
GSMUA_Achr1P08500_001	Banana	extracellular	67.0	74.17
AT1G11545.1	Thale cress	extracellular	74.33	73.11
PGSC0003DMT400005342	Potato	extracellular	64.0	64.43
TraesCS2D01G224300.1	Wheat	extracellular	64.67	63.82
TraesCS2B01G244500.1	Wheat	extracellular	64.67	63.4
Solyc02g080160.2.1	Tomato	extracellular	62.33	62.75
KXG36371	Sorghum	extracellular	62.33	58.62
Zm00001d021667_P001	Maize	plasma membrane	63.67	57.88
HORVU2Hr1G045330.4	Barley	extracellular, vacuole	63.33	51.21
VIT_17s0053g00610.t01	Wine grape	cytosol	36.33	50.46
VIT_11s0052g01330.t01	Wine grape	extracellular, vacuole	42.0	48.09
VIT_11s0052g01220.t01	Wine grape	extracellular	44.33	46.67
VIT_01s0150g00460.t01	Wine grape	extracellular	47.67	46.58
VIT_05s0062g00480.t01	Wine grape	cytosol	41.0	46.42
VIT_05s0062g00610.t01	Wine grape	cytosol	40.67	46.04
VIT_05s0062g00250.t01	Wine grape	extracellular	42.0	45.16
VIT_11s0052g01250.t01	Wine grape	extracellular	43.33	44.98
VIT_11s0052g01230.t01	Wine grape	cytosol	41.67	44.96
VIT_11s0052g01280.t01	Wine grape	endoplasmic reticulum, extracellular	44.33	44.93
VIT_11s0052g01320.t01	Wine grape	extracellular	44.33	44.93
VIT_11s0052g01310.t01	Wine grape	extracellular	40.0	44.61
VIT_05s0062g00240.t01	Wine grape	extracellular	41.33	44.13
VIT_11s0052g01200.t01	Wine grape	extracellular	43.67	44.11
VIT_11s0052g01260.t01	Wine grape	endoplasmic reticulum, extracellular	43.33	43.92
VIT_11s0052g01300.t01	Wine grape	extracellular	43.33	43.92
VIT_12s0134g00160.t01	Wine grape	extracellular	43.33	43.92
VIT_03s0088g00650.t01	Wine grape	extracellular, vacuole	43.0	43.73
VIT_10s0003g02440.t01	Wine grape	extracellular	39.33	43.22
VIT_11s0052g01270.t01	Wine grape	extracellular	42.67	43.1
VIT_11s0052g01340.t01	Wine grape	extracellular	39.0	43.01
VIT_11s0016g03480.t01	Wine grape	extracellular	40.33	41.58
VIT_11s0052g01180.t01	Wine grape	cytosol	43.0	40.19
VIT_11s0052g01190.t01	Wine grape	vacuole	43.67	35.5
VIT_11s0052g01210.t01	Wine grape	extracellular, plastid	42.33	8.02

Protein Annotations

EntrezGene:100257324	wikigene:100257324	Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	ProteinID:CBI23175
ProteinID:CBI23175.3	InterPro:ConA-like_dom_sf	UniProt:E0CVL4	EMBL:FN595248	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	EntrezGene:LOC100257324
wikigene:LOC100257324	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF1	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI00015CCC50
ArrayExpress:VIT_10s0116g00520	EnsemblPlantsGene:VIT_10s0116g00520	EnsemblPlants:VIT_10s0116g00520.t01	unigene:Vvi.15375	InterPro:XET_C	RefSeq:XP_002264995
RefSeq:XP_002264995.1	InterPro:XTH	:	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:E0CVL4]

Coordinates

chr10:-:236147..238110

Molecular Weight (calculated)

34818.5 Da

IEP (calculated)

4.357

GRAVY (calculated)

-0.584

Length

300 amino acids

Sequence
(BLAST)

001: MELQASPVPI LLCIAALMAA SCPPSQAEGQ SKSSFEDSFD IMWSEDHFKT SEDGQIWYLS LDKETGCGFQ TKQRYRFGWF SMKLKLVGGD SAGVVTAYYM
101: CSENGAGPER DELDIEFLGN RSGEPYLIQT NVYKNGTGGR EMRHMLWFDP TEEFHSYSIL WNNEQILFVV DRVPIRVYKN NGKANNFFPN EKPMYLFSSI
201: WNADDWATRG GMEKTDWKKA PFVSSYKDFS VDGCQWEDPY PACVSTTTQN WWDQYEAWHL SDSQKMDFAW VERNLVIYDY CKDTERYPQM LEECSLSPWD

Best Arabidopsis Sequence Match ( AT1G11545.1 )
(BLAST)

001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA

Arabidopsis Description

XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.