Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0052g01280.t01 | Wine grape | endoplasmic reticulum, extracellular | 95.27 | 95.27 |
| VIT_11s0052g01320.t01 | Wine grape | extracellular | 95.27 | 95.27 |
| VIT_11s0052g01300.t01 | Wine grape | extracellular | 95.27 | 95.27 |
| VIT_11s0052g01330.t01 | Wine grape | extracellular, vacuole | 79.05 | 89.31 |
| VIT_11s0052g01200.t01 | Wine grape | extracellular | 87.84 | 87.54 |
| VIT_11s0052g01220.t01 | Wine grape | extracellular | 82.43 | 85.61 |
| VIT_11s0052g01270.t01 | Wine grape | extracellular | 85.14 | 84.85 |
| VIT_11s0052g01340.t01 | Wine grape | extracellular | 75.68 | 82.35 |
| VIT_11s0052g01250.t01 | Wine grape | extracellular | 77.36 | 79.24 |
| Solyc03g093080.2.1 | Tomato | extracellular | 76.01 | 78.67 |
| PGSC0003DMT400038413 | Potato | extracellular | 76.01 | 78.67 |
| VIT_11s0052g01310.t01 | Wine grape | extracellular | 70.95 | 78.07 |
| Solyc03g093120.2.1 | Tomato | extracellular | 75.34 | 77.97 |
| Solyc03g093130.2.1 | Tomato | extracellular | 75.0 | 77.35 |
| VIT_11s0052g01180.t01 | Wine grape | cytosol | 83.78 | 77.26 |
| Solyc03g093110.2.1 | Tomato | extracellular | 74.32 | 76.66 |
| VIT_10s0003g02440.t01 | Wine grape | extracellular | 69.59 | 75.46 |
| VIT_05s0062g00250.t01 | Wine grape | extracellular | 70.95 | 75.27 |
| VIT_11s0052g01230.t01 | Wine grape | cytosol | 70.27 | 74.82 |
| VIT_05s0062g00610.t01 | Wine grape | cytosol | 66.89 | 74.72 |
| VIT_05s0062g00480.t01 | Wine grape | cytosol | 66.89 | 74.72 |
| VIT_11s0052g01190.t01 | Wine grape | vacuole | 92.23 | 73.98 |
| VIT_05s0062g00240.t01 | Wine grape | extracellular | 69.59 | 73.31 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 52.03 | 52.92 |
| VIT_17s0053g00610.t01 | Wine grape | cytosol | 38.18 | 52.31 |
| VIT_01s0150g00460.t01 | Wine grape | extracellular | 52.7 | 50.81 |
| VIT_03s0088g00650.t01 | Wine grape | extracellular, vacuole | 45.61 | 45.76 |
| VIT_12s0134g00160.t01 | Wine grape | extracellular | 44.93 | 44.93 |
| VIT_10s0116g00520.t01 | Wine grape | extracellular, vacuole | 43.92 | 43.33 |
| VIT_11s0052g01210.t01 | Wine grape | extracellular, plastid | 71.28 | 13.33 |
Protein Annotations
| EntrezGene:100251303 | wikigene:100251303 | Gene3D:2.60.120.200 | MapMan:50.2.4 | ProteinID:CCB44628 | ProteinID:CCB44628.1 |
| InterPro:ConA-like_dom_sf | UniProt:F6GXE2 | EMBL:FN594964 | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 |
| GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | EntrezGene:LOC100251303 | wikigene:LOC100251303 |
| PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 |
| PANTHER:PTHR31062:SF100 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00015CB3A4 | ArrayExpress:VIT_11s0052g01260 |
| EnsemblPlantsGene:VIT_11s0052g01260 | EnsemblPlants:VIT_11s0052g01260.t01 | unigene:Vvi.988 | InterPro:XET_C | RefSeq:XP_002274552 | RefSeq:XP_002274552.1 |
| InterPro:XTH | SEG:seg | : | : | : | : |
Description
Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6GXE2]
Coordinates
chr11:+:18989158..18990290
Molecular Weight (calculated)
32921.2 Da
IEP (calculated)
4.875
GRAVY (calculated)
-0.393
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPSTSNLS PKLLLLSLLF GSFVVASVGN LYQDLDITWG DGRAKILDNG QLLTLSLDKA SGSGFQSQDE YLFGKIDMQL KLVPGNSAGT VTAYYLSSQG
101: PTHDEIDFEF LGNLSGDPYI LHTNVFSQGK GNREQQFYLW FDPTADFHTY SVLWNPQRII FSVDGTPIRE FKNSESIGVP YPKNQPMRIY SSLWNADDWA
201: TRGGLVKTDW SLAPFTASYR NFNANACVWS SGSSSCSSNS PSSTSTNGGW YSQELDSTSQ ERMKWVQKNY MIYNYCTDTK RFPQGLPLEC TATTTS
101: PTHDEIDFEF LGNLSGDPYI LHTNVFSQGK GNREQQFYLW FDPTADFHTY SVLWNPQRII FSVDGTPIRE FKNSESIGVP YPKNQPMRIY SSLWNADDWA
201: TRGGLVKTDW SLAPFTASYR NFNANACVWS SGSSSCSSNS PSSTSTNGGW YSQELDSTSQ ERMKWVQKNY MIYNYCTDTK RFPQGLPLEC TATTTS
001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V
Arabidopsis Description
XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.