Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0052g01280.t01 | Wine grape | endoplasmic reticulum, extracellular | 97.97 | 97.97 |
| VIT_11s0052g01300.t01 | Wine grape | extracellular | 95.61 | 95.61 |
| VIT_11s0052g01260.t01 | Wine grape | endoplasmic reticulum, extracellular | 95.27 | 95.27 |
| VIT_11s0052g01330.t01 | Wine grape | extracellular, vacuole | 80.41 | 90.84 |
| VIT_11s0052g01200.t01 | Wine grape | extracellular | 88.85 | 88.55 |
| VIT_11s0052g01220.t01 | Wine grape | extracellular | 83.11 | 86.32 |
| VIT_11s0052g01270.t01 | Wine grape | extracellular | 85.47 | 85.19 |
| VIT_11s0052g01340.t01 | Wine grape | extracellular | 76.35 | 83.09 |
| Solyc03g093080.2.1 | Tomato | extracellular | 76.69 | 79.37 |
| PGSC0003DMT400038413 | Potato | extracellular | 76.69 | 79.37 |
| VIT_11s0052g01250.t01 | Wine grape | extracellular | 77.36 | 79.24 |
| VIT_11s0052g01310.t01 | Wine grape | extracellular | 71.96 | 79.18 |
| Solyc03g093120.2.1 | Tomato | extracellular | 76.35 | 79.02 |
| Solyc03g093130.2.1 | Tomato | extracellular | 75.68 | 78.05 |
| VIT_11s0052g01180.t01 | Wine grape | cytosol | 84.46 | 77.88 |
| Solyc03g093110.2.1 | Tomato | extracellular | 75.34 | 77.7 |
| VIT_10s0003g02440.t01 | Wine grape | extracellular | 70.61 | 76.56 |
| VIT_05s0062g00610.t01 | Wine grape | cytosol | 68.24 | 76.23 |
| VIT_05s0062g00480.t01 | Wine grape | cytosol | 68.24 | 76.23 |
| VIT_05s0062g00250.t01 | Wine grape | extracellular | 71.62 | 75.99 |
| VIT_11s0052g01190.t01 | Wine grape | vacuole | 93.58 | 75.07 |
| VIT_11s0052g01230.t01 | Wine grape | cytosol | 70.27 | 74.82 |
| VIT_05s0062g00240.t01 | Wine grape | extracellular | 70.95 | 74.73 |
| VIT_11s0016g03480.t01 | Wine grape | extracellular | 52.36 | 53.26 |
| VIT_01s0150g00460.t01 | Wine grape | extracellular | 53.38 | 51.47 |
| VIT_17s0053g00610.t01 | Wine grape | cytosol | 37.5 | 51.39 |
| VIT_03s0088g00650.t01 | Wine grape | extracellular, vacuole | 47.3 | 47.46 |
| VIT_12s0134g00160.t01 | Wine grape | extracellular | 45.61 | 45.61 |
| VIT_10s0116g00520.t01 | Wine grape | extracellular, vacuole | 44.93 | 44.33 |
| VIT_11s0052g01210.t01 | Wine grape | extracellular, plastid | 72.64 | 13.58 |
Protein Annotations
| EntrezGene:100252949 | wikigene:100252949 | Gene3D:2.60.120.200 | MapMan:50.2.4 | ProteinID:CCB44622 | ProteinID:CCB44622.1 |
| InterPro:ConA-like_dom_sf | UniProt:F6GXD6 | EMBL:FN594964 | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 |
| GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | EntrezGene:LOC100252949 | wikigene:LOC100252949 |
| PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 |
| PANTHER:PTHR31062:SF100 | SUPFAM:SSF49899 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00015CB3A9 | ArrayExpress:VIT_11s0052g01320 |
| EnsemblPlantsGene:VIT_11s0052g01320 | EnsemblPlants:VIT_11s0052g01320.t01 | unigene:Vvi.25041 | InterPro:XET_C | RefSeq:XP_002270416 | RefSeq:XP_002270416.1 |
| InterPro:XTH | SEG:seg | : | : | : | : |
Description
Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6GXD6]
Coordinates
chr11:+:19011166..19012250
Molecular Weight (calculated)
33020.4 Da
IEP (calculated)
6.264
GRAVY (calculated)
-0.425
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTSTSNLS PKLLLLSLLL GSFVVASVGN LYQDFDLTWG DGRAKILNNG QLLTLSLDKA SGSGFQSKNE YLFGKIDMQL KLVPGNSAGT VTAYYLSSQG
101: PTHDEIDFEF LGNLSGDPYI LHTNVFSQGK GNREQQFYLW FDPTADFHTY SILWNPQRII FSVDGTPIRE FKNSESIGVP FPKNQPMRIY SSLWNADDWA
201: TRGGLVKTDW TQAPFTASYR NFNANACVWS SRSSSCSSTS PSSTSTNGGW YSQELDSTSQ ERMKWVQKNY MIYNYCTDTK RFPQGLPPEC TATTTS
101: PTHDEIDFEF LGNLSGDPYI LHTNVFSQGK GNREQQFYLW FDPTADFHTY SILWNPQRII FSVDGTPIRE FKNSESIGVP FPKNQPMRIY SSLWNADDWA
201: TRGGLVKTDW TQAPFTASYR NFNANACVWS SRSSSCSSTS PSSTSTNGGW YSQELDSTSQ ERMKWVQKNY MIYNYCTDTK RFPQGLPPEC TATTTS
001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA
Arabidopsis Description
XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.