Factsheet for Solyc03g093130.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g093110.2.1	Tomato	extracellular	98.61	98.61
Solyc03g093080.2.1	Tomato	extracellular	98.26	98.6
Solyc03g093120.2.1	Tomato	extracellular	97.91	98.25
PGSC0003DMT400038413	Potato	extracellular	93.38	93.71
VIT_11s0052g01330.t01	Wine grape	extracellular, vacuole	71.78	78.63
KRH02893	Soybean	extracellular	75.61	76.14
KRH02890	Soybean	extracellular	75.61	76.14
VIT_11s0052g01280.t01	Wine grape	endoplasmic reticulum, extracellular	78.4	76.01
KRH19005	Soybean	vacuole	75.26	75.79
VIT_11s0052g01200.t01	Wine grape	extracellular	78.4	75.76
VIT_11s0052g01320.t01	Wine grape	extracellular	78.05	75.68
VIT_11s0052g01300.t01	Wine grape	extracellular	77.35	75.0
VIT_11s0052g01260.t01	Wine grape	endoplasmic reticulum, extracellular	77.35	75.0
VIT_11s0052g01270.t01	Wine grape	extracellular	76.66	74.07
KRH19002	Soybean	extracellular	73.52	74.04
KRH02892	Soybean	extracellular	73.17	73.17
KRH02894	Soybean	endoplasmic reticulum, extracellular	74.22	72.95
VIT_11s0052g01340.t01	Wine grape	extracellular	68.64	72.43
KRH19003	Soybean	extracellular	72.13	72.13
VIT_11s0052g01310.t01	Wine grape	extracellular	67.6	72.12
KRH02895	Soybean	cytosol	72.13	70.65
Solyc07g006860.2.1	Tomato	extracellular	69.34	69.82
VIT_11s0052g01180.t01	Wine grape	cytosol	78.05	69.78
Solyc12g098610.1.1	Tomato	nucleus	62.37	68.58
Solyc07g009380.2.1	Tomato	extracellular, nucleus	65.51	68.36
Solyc05g046290.2.1	Tomato	extracellular	67.94	67.71
Solyc09g092520.2.1	Tomato	nucleus	64.46	67.03
Solyc07g006870.2.1	Tomato	extracellular, vacuole	64.11	65.25
VIT_11s0052g01190.t01	Wine grape	vacuole	78.75	61.25
Solyc07g056000.2.1	Tomato	extracellular, nucleus	59.93	59.93
Solyc12g017240.1.1	Tomato	extracellular	59.93	59.52
Solyc07g055990.2.1	Tomato	nucleus	58.54	57.93
Solyc12g011030.1.1	Tomato	nucleus	52.96	54.87
Solyc07g006850.1.1	Tomato	golgi	64.46	54.09
Solyc12g007270.1.1	Tomato	extracellular	54.36	53.24
Solyc12g007250.1.1	Tomato	extracellular	50.17	49.48
Solyc12g007260.1.1	Tomato	extracellular	49.13	48.29
Solyc11g065600.1.1	Tomato	nucleus	49.13	48.12
Solyc03g098430.2.1	Tomato	extracellular	46.69	47.35
Solyc07g052980.2.1	Tomato	extracellular	48.78	47.3
Solyc01g099630.2.1	Tomato	extracellular	47.04	45.61
Solyc11g040140.1.1	Tomato	extracellular	47.39	45.33
Solyc02g091920.2.1	Tomato	nucleus	46.34	45.08
Solyc03g031800.2.1	Tomato	extracellular	44.6	43.39
Solyc10g005350.2.1	Tomato	extracellular	42.51	42.36
Solyc01g106650.2.1	Tomato	extracellular, vacuole	42.16	41.3
Solyc02g080160.2.1	Tomato	extracellular	42.16	40.6

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EMBL:AY497476	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	PFAM:PF00722
PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF101
UniProt:Q6RHY0	SUPFAM:SSF49899	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc03g093130.2	EnsemblPlants:Solyc03g093130.2.1	TMHMM:TMhelix
UniParc:UPI0000351974	InterPro:XET_C	InterPro:XTH	SEG:seg	:	:

Description

Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q6RHY0]

Coordinates

chr3:-:54305583..54306831

Molecular Weight (calculated)

32156.3 Da

IEP (calculated)

5.082

GRAVY (calculated)

-0.420

Length

287 amino acids

Sequence
(BLAST)

001: MASSSSKLVL VMCFMISAFG IAIGAKFDQE FDITWGDGRA KILNNGDLLT LSLDKISGSG FQSKNEYLFG KIDMQLKLVP GNSAGTVTAY YLSSQGPTHD
101: EIDFEFLGNL SGDPYTLHTN VFSQGKGNRE QQFHLWFDPT ADFHTYSITW NPQRIIFYVD GTPIREYKNS ESIGVSYPKN QPMRIYSSLW NADDWATRGG
201: LVKTDWSQAP FSASYRNFSA NACIPTSSSS CSSNSAASTS NSWLNEELDN TSQERLKWVQ KNYMVYDYCT DSKRFPQGFP ADCVQNI

Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)

001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA

Arabidopsis Description

XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.