Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026398 | Potato | extracellular | 95.05 | 95.05 |
| VIT_17s0053g00610.t01 | Wine grape | cytosol | 52.65 | 68.98 |
| GSMUA_Achr5P19320_001 | Banana | vacuole | 60.07 | 59.86 |
| Solyc12g098610.1.1 | Tomato | nucleus | 44.88 | 48.66 |
| Solyc07g052980.2.1 | Tomato | extracellular | 50.88 | 48.65 |
| Solyc02g091920.2.1 | Tomato | nucleus | 49.82 | 47.8 |
| Solyc03g093130.2.1 | Tomato | extracellular | 47.35 | 46.69 |
| Solyc07g006860.2.1 | Tomato | extracellular | 47.0 | 46.67 |
| Solyc03g093080.2.1 | Tomato | extracellular | 47.0 | 46.5 |
| Solyc03g093120.2.1 | Tomato | extracellular | 47.0 | 46.5 |
| Solyc05g046290.2.1 | Tomato | extracellular | 47.0 | 46.18 |
| Solyc03g093110.2.1 | Tomato | extracellular | 46.64 | 45.99 |
| Solyc11g040140.1.1 | Tomato | extracellular | 48.41 | 45.67 |
| Solyc07g056000.2.1 | Tomato | extracellular, nucleus | 46.29 | 45.64 |
| Solyc07g009380.2.1 | Tomato | extracellular, nucleus | 43.82 | 45.09 |
| Solyc12g017240.1.1 | Tomato | extracellular | 45.94 | 44.98 |
| Solyc09g092520.2.1 | Tomato | nucleus | 43.82 | 44.93 |
| Solyc07g006870.2.1 | Tomato | extracellular, vacuole | 44.52 | 44.68 |
| Solyc11g065600.1.1 | Tomato | nucleus | 45.94 | 44.37 |
| Solyc01g099630.2.1 | Tomato | extracellular | 45.58 | 43.58 |
| Solyc10g005350.2.1 | Tomato | extracellular | 43.82 | 43.06 |
| Solyc03g031800.2.1 | Tomato | extracellular | 44.52 | 42.71 |
| Solyc01g106650.2.1 | Tomato | extracellular, vacuole | 44.17 | 42.66 |
| Solyc07g055990.2.1 | Tomato | nucleus | 43.46 | 42.41 |
| Solyc02g080160.2.1 | Tomato | extracellular | 44.52 | 42.28 |
| Solyc12g007270.1.1 | Tomato | extracellular | 43.11 | 41.64 |
| Solyc12g007260.1.1 | Tomato | extracellular | 42.05 | 40.75 |
| Solyc12g007250.1.1 | Tomato | extracellular | 40.64 | 39.52 |
| Solyc12g011030.1.1 | Tomato | nucleus | 36.75 | 37.55 |
| Solyc07g006850.1.1 | Tomato | golgi | 45.23 | 37.43 |
Protein Annotations
| Gene3D:2.60.120.200 | MapMan:50.2.4 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005975 | GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 |
| GO:GO:0042546 | GO:GO:0048046 | GO:GO:0071555 | InterPro:IPR000757 | UniProt:K4BJQ8 | PFAM:PF00722 |
| PFAM:PF06955 | PIRSF:PIRSF005604 | ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF54 |
| SUPFAM:SSF49899 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc03g098430.2 | EnsemblPlants:Solyc03g098430.2.1 | UniParc:UPI0002768946 | InterPro:XET_C |
| InterPro:XTH | : | : | : | : | : |
Description
Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:K4BJQ8]
Coordinates
chr3:+:60736089..60737565
Molecular Weight (calculated)
31912.7 Da
IEP (calculated)
6.161
GRAVY (calculated)
-0.288
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSFMIVFLI LSMLLNPGVG VNFTDVFESS WAPDHIAVVG DEVTLSLDSA SGCGFESRFK YLFGKASAQI KLVEGDSAGT VIAFYMSSEG ANHDELDFEF
101: LGNVSGEPYL VQTNIYVNGS GDREQRHGLW FDPTTDFHTY SFFWNHHSII FSVDDIPIRV FKNKEKKGVP YPKNQGMGIY GSLWNADDWA TQGGRVKTNW
201: SHSPFVTTFR SFEIDACDLC GEDTIAAGAK CGKLAKFLWD KPSKNGLEKS KKRQFKMVQN KYLVYDYCKD TARFNQMPKE CLY
101: LGNVSGEPYL VQTNIYVNGS GDREQRHGLW FDPTTDFHTY SFFWNHHSII FSVDDIPIRV FKNKEKKGVP YPKNQGMGIY GSLWNADDWA TQGGRVKTNW
201: SHSPFVTTFR SFEIDACDLC GEDTIAAGAK CGKLAKFLWD KPSKNGLEKS KKRQFKMVQN KYLVYDYCKD TARFNQMPKE CLY
001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL
Arabidopsis Description
XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.