Factsheet for GSMUA_Achr5P19320_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0053g00610.t01	Wine grape	cytosol	56.34	74.07
PGSC0003DMT400026398	Potato	extracellular	60.56	60.78
Solyc03g098430.2.1	Tomato	extracellular	59.86	60.07
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	55.99	59.55
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	55.28	58.15
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	38.03	55.96
GSMUA_Achr10P...	Banana	cytosol	38.38	54.77
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	40.49	54.5
GSMUA_Achr9P13820_001	Banana	cytosol	39.79	54.07
GSMUA_Achr3P05220_001	Banana	cytosol	39.44	53.85
GSMUA_Achr7P16430_001	Banana	cytosol	39.44	52.58
GSMUA_Achr5P21880_001	Banana	cytosol	38.03	50.7
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	50.0	50.53
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	34.86	50.25
GSMUA_Achr8P34300_001	Banana	cytosol	47.54	49.27
GSMUA_Achr8P05120_001	Banana	extracellular	48.94	48.6
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	50.35	48.47
GSMUA_Achr3P26220_001	Banana	extracellular	48.24	47.9
GSMUA_Achr8P26470_001	Banana	extracellular	47.89	47.55
GSMUA_Achr10P...	Banana	extracellular	46.48	46.81
GSMUA_Achr1P08500_001	Banana	extracellular	44.01	46.13
GSMUA_Achr6P30850_001	Banana	extracellular	44.72	45.04
GSMUA_Achr1P14290_001	Banana	vacuole	46.48	44.59
GSMUA_Achr10P...	Banana	extracellular	44.72	44.1
GSMUA_Achr7P10940_001	Banana	extracellular	41.9	42.81
GSMUA_Achr8P19740_001	Banana	extracellular	39.79	42.01
GSMUA_Achr3P03390_001	Banana	extracellular	42.61	41.16
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	40.85	26.24

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr5G19320_001	EnsemblPlants:GSMUA_Achr5P19320_001	EnsemblPlants:GSMUA_Achr5T19320_001
InterPro:IPR000757	UniProt:M0SZW1	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF54	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI00029598FD
InterPro:XET_C	InterPro:XTH	SEG:seg	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr5G19320_001]

Coordinates

chr5:-:20944970..20946059

Molecular Weight (calculated)

31919.6 Da

IEP (calculated)

6.028

GRAVY (calculated)

-0.312

Length

284 amino acids

Sequence
(BLAST)

001: MGWSKVSRTL LCCLCLAALL TSVSSADFGD LFQPYWAADH IVAMDGEPLK LTLDNTSGCG FESKKKYLFG QTSMQIKLVE GDSAGTVTAF YMSSDGPNHN
101: ELDFEFLGNV TGEPYLVQTN VYVNGTGNRE QRHSLWFDPT ADFHTYSILW NRYHIRFLVD GVPMRMFANK EAAGVLYPKD QAMGVYASVW NADDWATQGG
201: RVKTNWSHAP FVTAFRGYEI DACEAEEATG GCAGGGVFWW DAPAMSGLSP HQRRQLRWVQ RRHLVYDYCK DRPRFHEMPG ECLS

Best Arabidopsis Sequence Match ( AT4G03210.1 )
(BLAST)

001: MVGMDLFKCV MMIMVLVVSC GEAVSGAKFD ELYRSSWAMD HCVNEGEVTK LKLDNYSGAG FESRSKYLFG KVSIQIKLVE GDSAGTVTAF YMSSDGPNHN
101: EFDFEFLGNT TGEPYIVQTN IYVNGVGNRE QRLNLWFDPT TEFHTYSILW SKRSVVFMVD ETPIRVQKNL EEKGIPFAKD QAMGVYSSIW NADDWATQGG
201: LVKTDWSHAP FVASYKEFQI DACEIPTTTD LSKCNGDQKF WWDEPTVSEL SLHQNHQLIW VRANHMIYDY CFDATRFPVT PLECQHHRHL

Arabidopsis Description

XTH9Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178V222]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.