Factsheet for GSMUA_Achr6P30850_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	extracellular	79.43	77.78
GSMUA_Achr10P...	Banana	extracellular	77.66	77.66
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	50.0	73.06
GSMUA_Achr9P13820_001	Banana	cytosol	52.48	70.81
GSMUA_Achr3P05220_001	Banana	cytosol	51.42	69.71
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	51.77	69.19
GSMUA_Achr10P...	Banana	cytosol	48.58	68.84
GSMUA_Achr5P21880_001	Banana	cytosol	51.42	68.08
KRH02889	Soybean	extracellular	69.5	67.35
GSMUA_Achr7P16430_001	Banana	cytosol	50.71	67.14
KRH19006	Soybean	vacuole	69.5	66.89
HORVU7Hr1G098370.1	Barley	extracellular	67.02	66.32
EER90302	Sorghum	extracellular	67.02	65.62
TraesCS7B01G327400.1	Wheat	extracellular	66.31	65.61
TraesCS7A01G427100.1	Wheat	extracellular	66.31	65.61
Os06t0696600-01	Rice	extracellular	66.67	65.28
Solyc07g006860.2.1	Tomato	extracellular	65.96	65.26
TraesCS7A01G427300.1	Wheat	extracellular	65.96	65.26
TraesCS7D01G419400.1	Wheat	vacuole	66.31	65.16
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	64.54	64.77
PGSC0003DMT400048241	Potato	extracellular	64.54	63.86
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	43.97	62.94
Bra038819.1-P	Field mustard	cytosol, extracellular, nucleus	50.71	59.83
AT2G18800.1	Thale cress	extracellular	64.18	59.34
CDY49308	Canola	extracellular	65.25	58.6
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	63.48	54.74
GSMUA_Achr8P19740_001	Banana	extracellular	48.23	50.56
GSMUA_Achr3P26220_001	Banana	extracellular	48.58	47.9
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	45.04	47.57
Zm00001d014614_P001	Maize	nucleus, plastid	63.48	47.48
Zm00001d014615_P002	Maize	extracellular	63.48	47.48
GSMUA_Achr8P34300_001	Banana	cytosol	46.1	47.45
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	45.39	47.41
GSMUA_Achr3P03390_001	Banana	extracellular	49.29	47.28
GSMUA_Achr8P05120_001	Banana	extracellular	47.87	47.2
GSMUA_Achr8P26470_001	Banana	extracellular	47.16	46.5
GSMUA_Achr7P10940_001	Banana	extracellular	45.04	45.68
GSMUA_Achr5P19320_001	Banana	vacuole	45.04	44.72
GSMUA_Achr1P08500_001	Banana	extracellular	41.49	43.17
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	44.68	42.71
GSMUA_Achr1P14290_001	Banana	vacuole	44.33	42.23
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	44.33	28.28

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr6G30850_001	EnsemblPlants:GSMUA_Achr6P30850_001
EnsemblPlants:GSMUA_Achr6T30850_001	InterPro:IPR000757	UniProt:M0TBN0	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF100	SUPFAM:SSF49899
SignalP:SignalP-noTM	UniParc:UPI000294DEB2	InterPro:XET_C	InterPro:XTH	SEG:seg	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:GMGC_GENE;Acc:GSMUA_Achr6G30850_001]

Coordinates

chr6:-:30807419..30808429

Molecular Weight (calculated)

31547.8 Da

IEP (calculated)

6.115

GRAVY (calculated)

-0.333

Length

282 amino acids

Sequence
(BLAST)

001: MASCASLLLL LALLATSAST SLAGNFYQDV DITWGDGRAK ILNNGQLLTL SLDKYSGSGF QSKDQYVYGK FDMQLKLVPG NSAGTVTTFY LSSQGAAHDE
101: IDLEFLGNLS GDPYVLHTNV YSQGKGNREQ QFYLWFDPTK DFHTYSILWN PRHIVIYVDG TSIREFRNRE SVGVPYPKSQ ATRVYSSLWD AEDWATRGGL
201: VKTDWSQAPF TAAFGNYNAN GCVWPSGASS CSSGTSNSWM WEEFDATSLK KLRWVQKNYM IYNYCTDVKR FPQGLPPECF AS

Best Arabidopsis Sequence Match ( AT4G25810.1 )
(BLAST)

001: MAMISYSTIV VALLASFMIC SVSANFQRDV EITWGDGRGQ ITNNGDLLTL SLDKASGSGF QSKNEYLFGK IDMQIKLVAG NSAGTVTAYY LKSPGSTWDE
101: IDFEFLGNLS GDPYTLHTNV FTQGKGDREQ QFKLWFDPTS DFHTYSILWN PQRIIFSVDG TPIREFKNME SQGTLFPKNQ PMRMYSSLWN AEEWATRGGL
201: VKTDWSKAPF TASYRGFNEE ACVVINGQSS CPNVSGQGST GSWLSQELDS TGQEQMRWVQ NNYMIYNYCT DAKRFPQGLP RECLAA

Arabidopsis Description

XTH23Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:UniProtKB/Swiss-Prot;Acc:Q38910]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.