Factsheet for GSMUA_Achr1P10380_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04364	Soybean	extracellular	69.15	69.86
GSMUA_Achr8P26470_001	Banana	extracellular	67.46	69.58
GSMUA_Achr3P26220_001	Banana	extracellular	66.78	68.88
KRH58172	Soybean	extracellular, vacuole	67.46	68.38
GSMUA_Achr8P05120_001	Banana	extracellular	66.1	68.18
Bra024415.1-P	Field mustard	extracellular	65.42	67.72
CDY08756	Canola	extracellular	65.42	67.72
CDY45623	Canola	extracellular	65.42	67.72
Solyc02g091920.2.1	Tomato	nucleus	66.1	66.1
AT5G65730.1	Thale cress	extracellular	65.08	65.75
AT4G37800.1	Thale cress	extracellular, vacuole	65.08	65.53
PGSC0003DMT400055138	Potato	extracellular	65.42	65.42
CDX72656	Canola	extracellular, vacuole	64.75	65.41
Bra017855.1-P	Field mustard	extracellular, vacuole	64.41	65.07
KRH77174	Soybean	extracellular	65.08	64.86
CDY31620	Canola	extracellular, vacuole	64.41	64.85
KRH28311	Soybean	extracellular, vacuole	64.75	64.31
GSMUA_Achr9P13820_001	Banana	cytosol	40.68	57.42
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	36.95	56.48
GSMUA_Achr10P...	Banana	cytosol	37.97	56.28
GSMUA_Achr3P05220_001	Banana	cytosol	39.66	56.25
GSMUA_Achr7P16430_001	Banana	cytosol	39.66	54.93
GSMUA_Achr8P34300_001	Banana	cytosol	50.17	54.01
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	37.97	53.08
GSMUA_Achr5P21880_001	Banana	cytosol	38.31	53.05
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	34.92	52.28
GSMUA_Achr5P19320_001	Banana	vacuole	48.47	50.35
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	47.46	49.82
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	44.07	48.15
GSMUA_Achr1P08500_001	Banana	extracellular	44.07	47.97
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	43.05	47.57
GSMUA_Achr10P...	Banana	extracellular	45.42	46.53
GSMUA_Achr10P...	Banana	extracellular	44.07	46.1
GSMUA_Achr1P14290_001	Banana	vacuole	46.1	45.95
GSMUA_Achr8P19740_001	Banana	extracellular	41.36	45.35
GSMUA_Achr6P30850_001	Banana	extracellular	42.71	44.68
GSMUA_Achr3P03390_001	Banana	extracellular	42.71	42.86
GSMUA_Achr7P10940_001	Banana	extracellular	39.32	41.73
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	44.07	29.41

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411
GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSMUA_Achr1G10380_001	EnsemblPlants:GSMUA_Achr1P10380_001	EnsemblPlants:GSMUA_Achr1T10380_001
InterPro:IPR000757	UniProt:M0RYP7	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034
PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF48	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0002966319
InterPro:XET_C	InterPro:XTH	SEG:seg	:	:	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr1G10380_001]

Coordinates

chr1:-:7843068..7844869

Molecular Weight (calculated)

32826.6 Da

IEP (calculated)

7.589

GRAVY (calculated)

-0.233

Length

295 amino acids

Sequence
(BLAST)

001: MAMAKTAFFR AAVFSLLPLL SRLPPSMARP ADFARDFHVT WADSHVSPTG GGAAIQLLLD RSSGCGFASK NKLMFGHVSM KIKLISGDSA GTVTAFYLSS
101: ETDAIRDELD FEFLGNRSGQ PYTVQTNVYA HGKGDREQRV NLWFDPSADF HTYSILWNHH HVVFFVDAIP IRVYKNNQAR GVAYPDAQPM GIYSTLWNGD
201: DWATRGGLEK IDWGKAPFRA YYKDFDIEAA CAAPAGGLGS CATTAANWWE APSFQQLNAA QARAYRWVRV NHLVYDYCTD RTRYPVPPPE CLAGY

Best Arabidopsis Sequence Match ( AT4G37800.1 )
(BLAST)

001: MVVSLFSSRN VFYTLSLCLF AALYQPVMSR PAKFEDDFRI AWSDTHITQI DGGRAIQLKL DPSSGCGFAS KKQYLFGRVS MKIKLIPGDS AGTVTAFYMN
101: SDTDSVRDEL DFEFLGNRSG QPYTVQTNVF AHGKGDREQR VNLWFDPSRD FHEYAISWNH LRIVFYVDNV PIRVYKNNEA RKVPYPRFQP MGVYSTLWEA
201: DDWATRGGIE KINWSRAPFY AYYKDFDIEG CPVPGPADCP ANSKNWWEGS AYHQLSPVEA RSYRWVRVNH MVYDYCTDKS RFPVPPPECS AGI

Arabidopsis Description

XTH7Probable xyloglucan endotransglucosylase/hydrolase protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LER3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.