Factsheet for GSMUA_Achr3P05200_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	cytosol, extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P13820_001	Banana	cytosol	78.17	73.68
GSMUA_Achr3P05220_001	Banana	cytosol	77.67	73.56
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	71.57	73.06
GSMUA_Achr7P16430_001	Banana	cytosol	77.16	71.36
GSMUA_Achr5P21880_001	Banana	cytosol	75.13	69.48
GSMUA_Achr10P...	Banana	cytosol	70.05	69.35
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	67.51	59.64
GSMUA_Achr8P15560_001	Banana	cytosol, extracellular, nucleus	58.88	54.98
CDY02738	Canola	extracellular, nucleus, vacuole	54.82	50.23
VIT_11s0052g01230.t01	Wine grape	cytosol	66.5	47.12
Os06t0697000-02	Rice	extracellular	68.02	46.21
TraesCS7D01G419200.1	Wheat	extracellular	67.01	46.15
TraesCS7A01G427000.1	Wheat	extracellular	67.01	46.15
TraesCS7B01G327200.1	Wheat	extracellular	67.01	46.15
HORVU7Hr1G098320.3	Barley	vacuole	67.51	46.02
TraesCS7D01G419100.1	Wheat	extracellular	67.01	45.83
TraesCS7A01G426900.1	Wheat	extracellular	66.5	45.8
TraesCS7A01G426100.1	Wheat	vacuole	67.01	45.67
TraesCS7B01G326900.1	Wheat	extracellular	67.01	45.67
TraesCS7A01G426700.1	Wheat	extracellular	67.01	45.67
HORVU0Hr1G022110.1	Barley	extracellular, vacuole	67.51	45.55
TraesCS7B01G327000.1	Wheat	extracellular	67.01	45.21
TraesCS7A01G426600.1	Wheat	vacuole	66.5	45.17
TraesCS7D01G419300.1	Wheat	extracellular	66.5	45.17
HORVU7Hr1G098440.2	Barley	extracellular	64.97	44.76
GSMUA_Achr10P...	Banana	extracellular	63.45	44.33
TraesCS7A01G427600.1	Wheat	extracellular	64.97	44.29
TraesCS7D01G419900.1	Wheat	extracellular	64.47	44.25
HORVU7Hr1G098260.1	Barley	vacuole	65.48	44.18
GSMUA_Achr6P30850_001	Banana	extracellular	62.94	43.97
Solyc07g006870.2.1	Tomato	extracellular, vacuole	62.94	43.97
EER90303	Sorghum	extracellular, golgi, vacuole	67.01	43.85
EER88885	Sorghum	extracellular	64.97	43.84
TraesCS7B01G327700.1	Wheat	extracellular	64.47	43.79
GSMUA_Achr9P11180_001	Banana	extracellular, vacuole	62.44	43.77
PGSC0003DMT400048242	Potato	extracellular	61.93	43.73
Os06t0696400-01	Rice	extracellular	64.97	43.69
AT5G57550.1	Thale cress	extracellular	62.94	43.66
Bra002722.1-P	Field mustard	extracellular	62.44	43.31
Bra020434.1-P	Field mustard	extracellular	62.44	43.16
GSMUA_Achr10P...	Banana	extracellular	62.94	43.06
CDY67778	Canola	extracellular	61.93	42.96
CDY25904	Canola	extracellular	61.93	42.96
Zm00001d014617_P001	Maize	extracellular	64.47	42.62
AT5G57530.1	Thale cress	extracellular	61.42	42.46
Zm00001d014613_P001	Maize	plasma membrane	61.42	41.72
CDY11863	Canola	extracellular	60.41	41.61
AT5G57540.1	Thale cress	extracellular	59.9	41.55
TraesCS7D01G418600.1	Wheat	vacuole	67.01	41.38
Bra020436.1-P	Field mustard	extracellular	59.39	41.34
CDY67488	Canola	extracellular	59.39	41.34
CDX88627	Canola	extracellular	59.9	41.26
Bra002723.1-P	Field mustard	extracellular	58.88	40.56
CDY67779	Canola	extracellular	58.88	40.56
AT4G25820.1	Thale cress	extracellular	58.88	40.42
CDY69806	Canola	extracellular	57.36	39.79
Bra013923.1-P	Field mustard	extracellular	57.36	39.79
GSMUA_Achr8P34300_001	Banana	cytosol	55.33	39.78
Zm00001d009309_P001	Maize	extracellular, vacuole	55.84	39.71
CDY50186	Canola	extracellular	57.36	39.51
Bra019141.1-P	Field mustard	extracellular	57.36	39.51
CDX92733	Canola	extracellular	56.85	39.16
GSMUA_Achr8P19740_001	Banana	extracellular	51.78	37.92
Bra006814.1-P	Field mustard	extracellular	59.39	36.68
GSMUA_Achr3P03390_001	Banana	extracellular	54.31	36.39
GSMUA_Achr9P29980_001	Banana	extracellular, vacuole	49.24	36.33
GSMUA_Achr7P10940_001	Banana	extracellular	50.76	35.97
GSMUA_Achr8P26470_001	Banana	extracellular	51.78	35.66
GSMUA_Achr6P19100_001	Banana	extracellular, vacuole	48.22	35.19
GSMUA_Achr1P08500_001	Banana	extracellular	48.22	35.06
GSMUA_Achr8P05120_001	Banana	extracellular	50.76	34.97
GSMUA_Achr1P10380_001	Banana	extracellular, vacuole	52.28	34.92
GSMUA_Achr5P19320_001	Banana	vacuole	50.25	34.86
GSMUA_Achr3P26220_001	Banana	extracellular	50.25	34.62
Solyc07g006850.1.1	Tomato	golgi	59.9	34.5
PGSC0003DMT400048240	Potato	golgi	59.9	34.5
HORVU7Hr1G098280.1	Barley	extracellular, mitochondrion, vacuole	67.51	33.25
GSMUA_Achr1P14290_001	Banana	vacuole	47.21	31.42
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	51.27	22.85

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr3G05200_001	EnsemblPlants:GSMUA_Achr3P05200_001	EnsemblPlants:GSMUA_Achr3T05200_001	InterPro:IPR000757	UniProt:M0SBY8	PFAM:PF00722
ScanProsite:PS01034	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF101	SUPFAM:SSF49899	UniParc:UPI000295AFE5

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 23 [Source:GMGC_GENE;Acc:GSMUA_Achr3G05200_001]

Coordinates

chr3:+:3380315..3382021

Molecular Weight (calculated)

22506.8 Da

IEP (calculated)

10.046

GRAVY (calculated)

-0.456

Length

197 amino acids

Sequence
(BLAST)

001: MQIKLVPGNS AGTVTAYYLS SQGPTHDEID FEFLGNLSGD PYTLHTNVFT QGKGNREMQF KLWFDPTKDF HTYSILWNPR HIIFMVDGTP IRDFKNLESR
101: GIAFPKNQPM RIYSSLWNAE DWATRGGLIK TDWTKAPFVA SYRNFNANAC IKASGRMASY RLLFSSWLGQ LSSRPCRTKM ISHPPLFKKQ ANHTNAC

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.