Factsheet for Zm00001d014613_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88885	Sorghum	extracellular	85.86	85.27
Zm00001d009309_P001	Maize	extracellular, vacuole	78.97	82.67
Os06t0696400-01	Rice	extracellular	80.69	79.86
TraesCS7A01G427600.1	Wheat	extracellular	76.9	77.16
HORVU7Hr1G098440.2	Barley	extracellular	75.86	76.92
TraesCS7D01G419900.1	Wheat	extracellular	75.86	76.66
TraesCS7B01G327700.1	Wheat	extracellular	76.21	76.21
GSMUA_Achr3P05220_001	Banana	cytosol	51.72	72.12
GSMUA_Achr4P02240_001	Banana	cytosol, mitochondrion, nucleus	47.59	71.5
GSMUA_Achr9P13820_001	Banana	cytosol	51.38	71.29
GSMUA_Achr5P21880_001	Banana	cytosol	50.34	68.54
GSMUA_Achr7P16430_001	Banana	cytosol	50.34	68.54
GSMUA_Achr10P...	Banana	cytosol	46.55	67.84
Zm00001d014617_P001	Maize	extracellular	67.93	66.11
GSMUA_Achr3P05200_001	Banana	cytosol, plastid, vacuole	41.72	61.42
AT5G57550.1	Thale cress	extracellular	58.62	59.86
VIT_11s0052g01230.t01	Wine grape	cytosol	55.86	58.27
Bra020434.1-P	Field mustard	extracellular	57.24	58.25
CDY02738	Canola	extracellular, nucleus, vacuole	43.1	58.14
CDY25904	Canola	extracellular	56.9	58.1
CDY67778	Canola	extracellular	56.55	57.75
Bra002722.1-P	Field mustard	extracellular	56.21	57.39
AT4G25820.1	Thale cress	extracellular	55.86	56.45
CDY67779	Canola	extracellular	55.52	56.29
Bra002723.1-P	Field mustard	extracellular	55.52	56.29
AT5G57540.1	Thale cress	extracellular	54.83	55.99
CDY11863	Canola	extracellular	55.17	55.94
CDX88627	Canola	extracellular	54.83	55.59
CDY67488	Canola	extracellular	54.14	55.48
Bra020436.1-P	Field mustard	extracellular	54.14	55.48
Solyc07g006870.2.1	Tomato	extracellular, vacuole	53.79	55.32
CDY69806	Canola	extracellular	54.14	55.28
Bra013923.1-P	Field mustard	extracellular	54.14	55.28
PGSC0003DMT400048242	Potato	extracellular	53.1	55.2
AT5G57530.1	Thale cress	extracellular	54.14	55.09
CDX92733	Canola	extracellular	54.14	54.9
CDY50186	Canola	extracellular	53.79	54.55
Bra019141.1-P	Field mustard	extracellular	53.79	54.55
Zm00001d026250_P001	Maize	extracellular, vacuole	50.0	53.11
Zm00001d002410_P001	Maize	extracellular	50.0	52.35
Bra006814.1-P	Field mustard	extracellular	54.14	49.22
Zm00001d052651_P001	Maize	extracellular	48.97	47.81
PGSC0003DMT400048240	Potato	golgi	53.79	45.61
Solyc07g006850.1.1	Tomato	golgi	53.1	45.03
Zm00001d002412_P001	Maize	extracellular	46.21	44.97
Zm00001d026251_P001	Maize	extracellular	44.48	44.48
Zm00001d015977_P001	Maize	mitochondrion	45.86	44.19
Zm00001d014614_P001	Maize	nucleus, plastid	56.55	43.5
Zm00001d014615_P002	Maize	extracellular	56.55	43.5
Zm00001d046007_P001	Maize	extracellular	44.14	43.39
Zm00001d053320_P001	Maize	vacuole	43.1	42.96
Zm00001d050201_P001	Maize	extracellular	42.76	42.61
Zm00001d024378_P001	Maize	extracellular	41.72	42.16
Zm00001d024392_P001	Maize	mitochondrion	45.17	41.59
Zm00001d002193_P003	Maize	extracellular, vacuole	45.17	38.87
Zm00001d021667_P001	Maize	plasma membrane	43.45	38.18

Protein Annotations

EntrezGene:100283129	Gene3D:2.60.120.200	MapMan:50.2.4	UniProt:A0A1D6GUH2	ProteinID:AQK66621.1	InterPro:Beta_glucanase
InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737
ScanProsite:PS01034	PFscan:PS51257	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF42	SUPFAM:SSF49899
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000220B1FA	InterPro:XET_C	InterPro:XTH	EnsemblPlantsGene:Zm00001d014613
EnsemblPlants:Zm00001d014613_P001	EnsemblPlants:Zm00001d014613_T001	SEG:seg	:	:	:

Description

Xyloglucan endotransglucosylase/hydrolase protein 23

Coordinates

chr5:+:55643859..55644731

Molecular Weight (calculated)

32376.1 Da

IEP (calculated)

8.659

GRAVY (calculated)

-0.419

Length

290 amino acids

Sequence
(BLAST)

001: MRASALVCFV AVSACIACIA HGGNFYQDTE MTWGQGRGKV VDGGRGLDLS LDRASGSGFQ SKDEYLFGKI EMQMKLVPGN SAGTVTTLYL SSQGDAHDEI
101: DLEFLGNVSG EPYTLHTNVF TRGRGQREQQ FRLWFDPTAD FHTYSVVWNP RHVIFAVDGT PVRDFANREA RGVAFPRTQP MRVYASLWNA DDWATQGGRV
201: KADWARAPFV ASFRGFSADA CVWSGGRSQC PVGTMEEAGG GGGWWNQQLS DASYRRMRWV QRKFMIYNYC TDAKRFPQGR GVPAECRLRR

Best Arabidopsis Sequence Match ( AT5G57560.1 )
(BLAST)

001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA

Arabidopsis Description

XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.