Factsheet for Zm00001d024378_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13577	Sorghum	extracellular	86.76	87.06
Os08t0237800-00	Rice	extracellular, vacuole	64.46	61.06
TraesCS6B01G368300.1	Wheat	extracellular	59.23	57.63
TraesCS6D01G318500.1	Wheat	extracellular	58.54	56.95
TraesCS6A01G337600.1	Wheat	extracellular	58.19	56.61
Zm00001d026250_P001	Maize	extracellular, vacuole	45.3	47.62
Zm00001d026251_P001	Maize	extracellular	47.39	46.9
Zm00001d002410_P001	Maize	extracellular	43.9	45.49
Zm00001d002412_P001	Maize	extracellular	44.95	43.29
Zm00001d014613_P001	Maize	plasma membrane	42.16	41.72
Zm00001d014617_P001	Maize	extracellular	41.46	39.93
Zm00001d009309_P001	Maize	extracellular, vacuole	38.33	39.71
Zm00001d052651_P001	Maize	extracellular	39.72	38.38
Zm00001d024392_P001	Maize	mitochondrion	41.81	38.1
Zm00001d050201_P001	Maize	extracellular	38.33	37.8
Zm00001d046007_P001	Maize	extracellular	37.63	36.61
Zm00001d053320_P001	Maize	vacuole	36.24	35.74
Zm00001d002193_P003	Maize	extracellular, vacuole	41.81	35.61
Zm00001d015977_P001	Maize	mitochondrion	35.19	33.55
Zm00001d021667_P001	Maize	plasma membrane	35.54	30.91
Zm00001d014615_P002	Maize	extracellular	38.33	29.18
Zm00001d014614_P001	Maize	nucleus, plastid	38.33	29.18

Protein Annotations

EntrezGene:103641180	Gene3D:2.60.120.200	MapMan:50.2.4	ProteinID:AQK41090.1	InterPro:ConA-like_dom_sf	InterPro:GH16
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	UniProt:K7TQ85
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF58
SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002220E53	InterPro:XET_C	InterPro:XTH
EnsemblPlantsGene:Zm00001d024378	EnsemblPlants:Zm00001d024378_P001	EnsemblPlants:Zm00001d024378_T001	SEG:seg	:	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 21

Coordinates

chr10:+:68054718..68056244

Molecular Weight (calculated)

32053.5 Da

IEP (calculated)

5.315

GRAVY (calculated)

-0.342

Length

287 amino acids

Sequence
(BLAST)

001: MAAHLPSFCS RHASMAVAAA LMIVMATEAP AGVALLKDDI GFMWGPDHSF FYDDGNALAL CLEKSHGSGF RSNAANLYAR YDIDVKLVAN DSAGTVTTVY
101: LTTDDVRPGY HDEVDMEFLG NVTGEPYTLH TNIFVNSVGN REQQFRLWFD PTKEFHTYSV EWTPKNIIFL IDGTPIRVYK HEPSLGGTFP TQRHMRLDGS
201: LWNADDWATQ GGRVKTDWTR APFYAYYRNF RVTPCAPSSP SGVASCSDEP PAPAVLQKVR AEHLLYDYCE DQNRFKDTGL PKECTAD

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.