Factsheet for Zm00001d026250_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002410_P001	Maize	extracellular	88.28	87.0
EES12802	Sorghum	endoplasmic reticulum, extracellular	89.74	86.27
Os04t0604300-01	Rice	extracellular	78.02	76.07
TraesCS2B01G454800.1	Wheat	extracellular	72.89	71.07
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	72.53	70.71
TraesCS2A01G433800.1	Wheat	endoplasmic reticulum, extracellular	71.79	70.0
Zm00001d009309_P001	Maize	extracellular, vacuole	51.65	50.9
Zm00001d002412_P001	Maize	extracellular	54.58	50.0
Zm00001d014613_P001	Maize	plasma membrane	53.11	50.0
Zm00001d014617_P001	Maize	extracellular	54.21	49.66
Zm00001d026251_P001	Maize	extracellular	50.92	47.93
Zm00001d024378_P001	Maize	extracellular	47.62	45.3
Zm00001d050201_P001	Maize	extracellular	47.99	45.02
Zm00001d024392_P001	Maize	mitochondrion	48.72	42.22
Zm00001d046007_P001	Maize	extracellular	45.05	41.69
Zm00001d015977_P001	Maize	mitochondrion	45.42	41.2
Zm00001d053320_P001	Maize	vacuole	43.59	40.89
Zm00001d052651_P001	Maize	extracellular	43.96	40.4
Zm00001d014615_P002	Maize	extracellular	51.28	37.14
Zm00001d014614_P001	Maize	nucleus, plastid	51.28	37.14
Zm00001d021667_P001	Maize	plasma membrane	42.86	35.45
Zm00001d002193_P003	Maize	extracellular, vacuole	42.49	34.42

Protein Annotations

EntrezGene:103642034	Gene3D:2.60.120.200	MapMan:50.2.4	ProteinID:AQK45914.1	InterPro:ConA-like_dom_sf	InterPro:GH16
InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787
GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757
UniProt:K7U6H7	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF94	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI00022178D0	InterPro:XET_C
InterPro:XTH	EnsemblPlantsGene:Zm00001d026250	EnsemblPlants:Zm00001d026250_P001	EnsemblPlants:Zm00001d026250_T001	SEG:seg	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 21

Coordinates

chr10:-:141994182..141995509

Molecular Weight (calculated)

29989.9 Da

IEP (calculated)

4.889

GRAVY (calculated)

-0.252

Length

273 amino acids

Sequence
(BLAST)

001: MSSAFSSRAR VLLALLLGLY AACAAAAARV DDGLELTWGD GRGSVSPDGQ VLTLSLDHTS GSGFRSKDTF LFARADVQIK LVPNNSAGTV TTFYFVSEGP
101: WDVHDEVDLE FLGNVSGQPY TLHTNVYAGG SGSREQQFHL WFDPTADFHT YSIEWTQQHI LVLVDGTPVR EFKNHADWGV PYPSSQGMRL YGSLWNAEDW
201: ATQGGRVKTD WSQAPFVAQY RNFTAAAGGG YGLQMDAAAQ QAMKWARDNY MVYDYCADAK RFPLGVPPEC SMP

Best Arabidopsis Sequence Match ( AT3G23730.1 )
(BLAST)

001: MGRILNRTVL MTLLVVTMAG TAFSGSFNEE FDLTWGEHRG KIFSGGKMLS LSLDRVSGSG FKSKKEYLFG RIDMQLKLVA GNSAGTVTAY YLSSEGPTHD
101: EIDFEFLGNE TGKPYVLHTN VFAQGKGNRE QQFYLWFDPT KNFHTYSLVW RPQHIIFMVD NVPIRVFNNA EQLGVPFPKN QPMKIYSSLW NADDWATRGG
201: LVKTDWSKAP FTAYYRGFNA AACTVSSGSS FCDPKFKSSF TNGESQVANE LNAYGRRRLR WVQKYFMIYD YCSDLKRFPQ GFPPECRKSR V

Arabidopsis Description

XTH16Probable xyloglucan endotransglucosylase/hydrolase protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG58]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.