Factsheet for Zm00001d021667_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36371	Sorghum	extracellular	87.88	90.91
TraesCS2D01G224300.1	Wheat	extracellular	74.55	80.92
TraesCS2B01G244500.1	Wheat	extracellular	74.24	80.07
GSMUA_Achr1P08500_001	Banana	extracellular	56.97	69.37
HORVU2Hr1G045330.4	Barley	extracellular, vacuole	75.15	66.85
Solyc10g005350.2.1	Tomato	extracellular	56.06	64.24
VIT_10s0116g00520.t01	Wine grape	extracellular, vacuole	57.88	63.67
KRG91233	Soybean	extracellular	57.88	63.46
KRH35587	Soybean	extracellular	57.27	62.58
CDY49788	Canola	extracellular	56.67	62.54
Bra019846.1-P	Field mustard	extracellular	56.36	62.21
CDX97967	Canola	extracellular	56.36	62.21
Solyc03g031800.2.1	Tomato	extracellular	55.45	62.03
AT1G11545.1	Thale cress	extracellular	57.27	61.97
PGSC0003DMT400061841	Potato	extracellular	54.85	61.36
Solyc02g080160.2.1	Tomato	extracellular	51.52	57.05
PGSC0003DMT400005342	Potato	extracellular	51.21	56.71
Zm00001d052651_P001	Maize	extracellular	42.42	47.14
Zm00001d009309_P001	Maize	extracellular, vacuole	36.67	43.68
Zm00001d014613_P001	Maize	plasma membrane	38.18	43.45
Zm00001d014617_P001	Maize	extracellular	39.09	43.29
Zm00001d026250_P001	Maize	extracellular, vacuole	35.45	42.86
Zm00001d002410_P001	Maize	extracellular	35.76	42.6
Zm00001d002193_P003	Maize	extracellular, vacuole	41.82	40.95
Zm00001d046007_P001	Maize	extracellular	34.55	38.64
Zm00001d053320_P001	Maize	vacuole	33.94	38.49
Zm00001d015977_P001	Maize	mitochondrion	34.55	37.87
Zm00001d050201_P001	Maize	extracellular	32.42	36.77
Zm00001d026251_P001	Maize	extracellular	32.12	36.55
Zm00001d002412_P001	Maize	extracellular	32.73	36.24
Zm00001d024378_P001	Maize	extracellular	30.91	35.54
Zm00001d024392_P001	Maize	mitochondrion	33.64	35.24
Zm00001d014615_P002	Maize	extracellular	36.97	32.36
Zm00001d014614_P001	Maize	nucleus, plastid	36.97	32.36

Protein Annotations

EntrezGene:100381808	Gene3D:2.60.120.200	MapMan:50.2.4	EMBL:BT062321	InterPro:Beta_glucanase	UniProt:C0HJ15
InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0006073
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043	GO:GO:0016740
GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546	GO:GO:0048046
GO:GO:0071555	InterPro:IPR000757	ProteinID:ONM57949.1	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604
PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51257	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF1
SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI00019488BB	InterPro:XET_C	InterPro:XTH	EnsemblPlantsGene:Zm00001d021667
EnsemblPlants:Zm00001d021667_P001	EnsemblPlants:Zm00001d021667_T001	SEG:seg	:	:	:

Description

Probable xyloglucan endotransglucosylase/hydrolase protein 8

Coordinates

chr7:+:159561272..159563354

Molecular Weight (calculated)

35814.0 Da

IEP (calculated)

4.843

GRAVY (calculated)

-0.185

Length

330 amino acids

Sequence
(BLAST)

001: MTGRPWAGAP PPPLPLAVAV GVAALLSCCC CCCCQGASAT AAASFGDNFE ITGAEDHVKT SADGQTWYLY LDNKTGVGFQ TKQRYLFGWF SMKLKLVGND
101: SAGVVTAYYM CSDLDAAPLR DELDFEFLGN RSGEPYIIQT NVYHSGVGGR EMRHSLWFDP TADFHTYAIL WNPKQIVFFV DKVAIRVYPN DASKPPGGGG
201: GGDGFFPIAK PMYIFSSIWN ADDWATRGGL EKTDWAKAPF VSSYRDFAAD ACAWPPPAAG VAPSPPTPAC AAATGDSWWD QPPAWALDAG QRLDNAWVAR
301: NLLVYDYCDD RKRFPTPPEE CKLRPAATAS

Best Arabidopsis Sequence Match ( AT1G11545.1 )
(BLAST)

001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA

Arabidopsis Description

XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.