Factsheet for TraesCS2D01G224300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G244500.1	Wheat	extracellular	98.03	97.39
HORVU2Hr1G045330.4	Barley	extracellular, vacuole	94.41	77.36
KXG36371	Sorghum	extracellular	79.93	76.18
Zm00001d021667_P001	Maize	plasma membrane	80.92	74.55
GSMUA_Achr1P08500_001	Banana	extracellular	62.5	70.11
VIT_10s0116g00520.t01	Wine grape	extracellular, vacuole	63.82	64.67
KRG91233	Soybean	extracellular	63.49	64.12
Solyc10g005350.2.1	Tomato	extracellular	60.53	63.89
Bra019846.1-P	Field mustard	extracellular	62.5	63.55
CDX97967	Canola	extracellular	62.5	63.55
CDY49788	Canola	extracellular	62.5	63.55
KRH35587	Soybean	extracellular	62.83	63.24
PGSC0003DMT400061841	Potato	extracellular	61.18	63.05
Solyc03g031800.2.1	Tomato	extracellular	61.18	63.05
AT1G11545.1	Thale cress	extracellular	62.83	62.62
PGSC0003DMT400005342	Potato	extracellular	55.92	57.05
Solyc02g080160.2.1	Tomato	extracellular	55.92	57.05
TraesCS7D01G418700.1	Wheat	cytosol, mitochondrion, nucleus	36.51	49.78
TraesCS4D01G142800.1	Wheat	extracellular	46.71	48.3
TraesCS7D01G419300.1	Wheat	extracellular	45.72	47.93
TraesCS7D01G419100.1	Wheat	extracellular	44.08	46.53
TraesCS2D01G045100.1	Wheat	cytosol	32.57	46.48
TraesCS7D01G419200.1	Wheat	extracellular	43.42	46.15
TraesCS7D01G419900.1	Wheat	extracellular	40.79	43.21
TraesCS7D01G418600.1	Wheat	vacuole	44.74	42.63
TraesCS2D01G498400.1	Wheat	extracellular	40.46	42.56
TraesCS7D01G339400.1	Wheat	extracellular	40.46	42.56
TraesCS7D01G419400.1	Wheat	vacuole	39.8	42.16
TraesCS2D01G498500.2	Wheat	vacuole	39.8	41.87
TraesCS2D01G498600.1	Wheat	extracellular, vacuole	39.8	41.87
TraesCS2D01G498700.1	Wheat	extracellular, vacuole	39.8	41.87
TraesCS2D01G498800.1	Wheat	vacuole	39.8	41.87
TraesCS2D01G086800.1	Wheat	extracellular	37.17	39.93
TraesCS7D01G419600.1	Wheat	extracellular, vacuole	39.8	39.8
TraesCS2D01G432100.1	Wheat	vacuole	38.82	38.94
TraesCS2D01G431600.1	Wheat	vacuole	38.16	38.93
TraesCS2D01G431500.1	Wheat	extracellular	39.8	38.53
TraesCS2D01G431800.1	Wheat	endoplasmic reticulum, extracellular	34.54	37.5
TraesCS2D01G431700.1	Wheat	extracellular, vacuole	36.51	37.5
TraesCS6D01G318500.1	Wheat	extracellular	35.86	36.95

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	InterPro:IPR000757	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737
ScanProsite:PS01034	PFscan:PS51257	PFscan:PS51762	PANTHER:PTHR31062	PANTHER:PTHR31062:SF1	SUPFAM:SSF49899
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2D01G224300	EnsemblPlants:TraesCS2D01G224300.1	InterPro:XET_C	InterPro:XTH	TIGR:cd02176
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:192148581..192150337

Molecular Weight (calculated)

33873.6 Da

IEP (calculated)

5.002

GRAVY (calculated)

-0.347

Length

304 amino acids

Sequence
(BLAST)

001: MGRPCVGALL ACAAVAASCC GCFQFQGAAA AATPSFGDNF DITGAEDHVK TSPDGQTWYL SLDNKTGVGF QTKQKYLFGW FSMKLKLVGN DSAGVVTAYY
101: MCSDLDAAPE RDELDFEFLG NRTGEPYIIQ TNVYRSGVGG REMRHSLWFD PTAEFHSYSI LWNPKQIVFF VDKVPIREYR NSDKPNRFFP IMKPMYVFSS
201: IWNADDWATR GGLEKTDWTK GPFVSSYSDF TADACAWATG PAPPACAAAT GNSWWDQPPA WALDDGQRRD SGWVARNLVI YDYCDDRKRF PAVPEECALR
301: TKTS

Best Arabidopsis Sequence Match ( AT1G11545.1 )
(BLAST)

001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA

Arabidopsis Description

XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.