Factsheet for Solyc02g080160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005342	Potato	extracellular	96.64	96.64
Solyc10g005350.2.1	Tomato	extracellular	70.47	72.92
Solyc03g031800.2.1	Tomato	extracellular	71.48	72.2
KRH35587	Soybean	extracellular	67.11	66.23
KRG91233	Soybean	extracellular	66.44	65.78
Bra019846.1-P	Field mustard	extracellular	63.76	63.55
CDX97967	Canola	extracellular	63.76	63.55
CDY49788	Canola	extracellular	63.42	63.21
VIT_10s0116g00520.t01	Wine grape	extracellular, vacuole	62.75	62.33
AT1G11545.1	Thale cress	extracellular	63.09	61.64
GSMUA_Achr1P08500_001	Banana	extracellular	55.37	60.89
TraesCS2D01G224300.1	Wheat	extracellular	57.05	55.92
TraesCS2B01G244500.1	Wheat	extracellular	56.71	55.23
KXG36371	Sorghum	extracellular	57.05	53.29
Zm00001d021667_P001	Maize	plasma membrane	57.05	51.52
Solyc11g065600.1.1	Tomato	nucleus	46.31	47.1
Solyc02g091920.2.1	Tomato	nucleus	45.3	45.76
Solyc05g046290.2.1	Tomato	extracellular	43.96	45.49
HORVU2Hr1G045330.4	Barley	extracellular, vacuole	56.38	45.28
Solyc11g040140.1.1	Tomato	extracellular	45.3	45.0
Solyc01g099630.2.1	Tomato	extracellular	44.3	44.59
Solyc03g098430.2.1	Tomato	extracellular	42.28	44.52
Solyc07g052980.2.1	Tomato	extracellular	43.96	44.26
Solyc07g009380.2.1	Tomato	extracellular, nucleus	40.6	44.0
Solyc12g098610.1.1	Tomato	nucleus	38.26	43.68
Solyc07g006860.2.1	Tomato	extracellular	41.61	43.51
Solyc03g093080.2.1	Tomato	extracellular	41.28	43.01
Solyc03g093120.2.1	Tomato	extracellular	40.94	42.66
Solyc09g092520.2.1	Tomato	nucleus	39.26	42.39
Solyc07g006870.2.1	Tomato	extracellular, vacuole	39.93	42.2
Solyc03g093130.2.1	Tomato	extracellular	40.6	42.16
Solyc03g093110.2.1	Tomato	extracellular	39.93	41.46
Solyc12g007270.1.1	Tomato	extracellular	39.93	40.61
Solyc07g055990.2.1	Tomato	nucleus	38.93	40.0
Solyc01g106650.2.1	Tomato	extracellular, vacuole	39.26	39.93
Solyc12g017240.1.1	Tomato	extracellular	38.59	39.79
Solyc07g056000.2.1	Tomato	extracellular, nucleus	37.92	39.37
Solyc12g007250.1.1	Tomato	extracellular	37.25	38.14
Solyc12g007260.1.1	Tomato	extracellular	37.25	38.01
Solyc12g011030.1.1	Tomato	nucleus	34.9	37.55
Solyc07g006850.1.1	Tomato	golgi	39.6	34.5

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	InterPro:Beta_glucanase	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	UniProt:K4B9N7
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF1	SUPFAM:SSF49899	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g080160.2	EnsemblPlants:Solyc02g080160.2.1
TMHMM:TMhelix	UniParc:UPI0002768E23	InterPro:XET_C	InterPro:XTH	:	:

Description

Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:K4B9N7]

Coordinates

chr2:-:44460578..44462486

Molecular Weight (calculated)

34391.2 Da

IEP (calculated)

6.855

GRAVY (calculated)

-0.414

Length

298 amino acids

Sequence
(BLAST)

001: MESNASSMAR VLLILSVIFT LFSSSNGVVG GAFEENFSKS CPGTHFKTSK DGQIWYLTLD QVSDCGFITK QSYRFGWYST KLKLVGGDSA GVVTAFYMCS
101: EVEAGPLRDE IDFEFLGNRT GQPYLIQTNV YNNGSGGREM RHQLWFDPTL DFHTYSILWN SHQIVFFVDK VPIRVYKNAN HTNNFFPAQR PMYVFSSIWN
201: ADNWATRGGL DKINWENAPF VASYKDFTID ACPWKNPYPA CASSTTQHWW DQNNTWHLSS KEKIDYAWVQ RNFVVYNYCQ DTVRNKYKPQ ECWLNPLD

Best Arabidopsis Sequence Match ( AT1G11545.1 )
(BLAST)

001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA

Arabidopsis Description

XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.