CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97967	Canola	extracellular	97.66	97.66
AT1G11545.1	Thale cress	extracellular	93.65	91.8
KRG91233	Soybean	extracellular	78.6	78.07
KRH35587	Soybean	extracellular	77.26	76.49
VIT_10s0116g00520.t01	Wine grape	extracellular, vacuole	75.25	75.0
PGSC0003DMT400061841	Potato	extracellular	72.24	73.22
Solyc03g031800.2.1	Tomato	extracellular	71.57	72.54
Solyc10g005350.2.1	Tomato	extracellular	68.9	71.53
GSMUA_Achr1P08500_001	Banana	extracellular	61.2	67.53
PGSC0003DMT400005342	Potato	extracellular	64.55	64.77
Solyc02g080160.2.1	Tomato	extracellular	63.21	63.42
TraesCS2D01G224300.1	Wheat	extracellular	63.55	62.5
TraesCS2B01G244500.1	Wheat	extracellular	63.55	62.09
KXG36371	Sorghum	extracellular	61.54	57.68
Zm00001d021667_P001	Maize	plasma membrane	62.54	56.67
HORVU2Hr1G045330.4	Barley	extracellular, vacuole	62.54	50.4
CDX69621	Canola	vacuole	48.49	49.49
CDY09832	Canola	vacuole	48.16	49.15
CDX78542	Canola	vacuole	48.83	48.99
CDX70524	Canola	vacuole	48.49	48.66
CDX93096	Canola	extracellular	47.83	48.47
CDY69237	Canola	extracellular	47.49	48.14
CDY08756	Canola	extracellular	45.48	47.72
CDY45623	Canola	extracellular	45.15	47.37
CDY21985	Canola	extracellular	45.48	46.9
CDY22110	Canola	extracellular	45.48	46.9
CDY53771	Canola	extracellular	44.82	46.21
CDY02738	Canola	extracellular, nucleus, vacuole	33.11	46.05
CDX90896	Canola	extracellular	44.48	45.86
CDX72656	Canola	extracellular, vacuole	44.48	45.55
CDX94413	Canola	extracellular	43.48	45.3
CDY39193	Canola	extracellular	41.14	45.22
CDY31620	Canola	extracellular, vacuole	44.15	45.05
CDY66832	Canola	extracellular	40.47	44.65
CDY61576	Canola	vacuole	41.81	44.64
CDX89393	Canola	extracellular	42.81	44.6
CDY67488	Canola	extracellular	41.81	44.17
CDX88627	Canola	extracellular	42.14	44.06
CDY11863	Canola	extracellular	42.14	44.06
CDY67779	Canola	extracellular	42.14	44.06
CDY14905	Canola	extracellular	39.8	43.91
CDX72228	Canola	extracellular	40.8	43.73
CDX68640	Canola	extracellular	41.14	43.62
CDY25904	Canola	extracellular	41.14	43.31
CDY67778	Canola	extracellular	41.14	43.31
CDY69806	Canola	extracellular	41.14	43.31
CDY28174	Canola	extracellular	40.8	43.26
CDX71167	Canola	vacuole	42.81	43.1
CDY50186	Canola	extracellular	41.14	43.01
CDY59998	Canola	extracellular	40.47	42.76
CDX92733	Canola	extracellular	40.8	42.66
CDY59999	Canola	extracellular	35.12	42.51
CDX72227	Canola	extracellular	38.46	42.44
CDY25903	Canola	extracellular	36.79	42.31
CDY67487	Canola	extracellular	36.79	42.31
CDY27126	Canola	extracellular	40.8	42.21
CDY35228	Canola	extracellular	38.46	39.38
CDY06861	Canola	extracellular	38.46	39.38
CDY03539	Canola	endoplasmic reticulum, extracellular	40.47	38.78
CDY49308	Canola	extracellular	38.46	36.62
CDY02741	Canola	extracellular	35.79	36.39
CDY12366	Canola	extracellular	33.78	35.56
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	38.8	35.47

Protein Annotations

KEGG:00500+2.4.1.20	Gene3D:2.60.120.200	MapMan:50.2.4	GO:A0A078IL30	UniProt:A0A078IL30	InterPro:Beta_glucanase
EnsemblPlants:CDY49788	ProteinID:CDY49788	ProteinID:CDY49788.1	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSBRNA2T00093808001	InterPro:IPR000757
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF1	SUPFAM:SSF49899	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001B6365F
InterPro:XET_C	InterPro:XTH	SEG:seg	:	:	:

Description

BnaCnng18010DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078IL30]

Coordinates

chrLK032859:-:17618..19073

Molecular Weight (calculated)

34922.7 Da

IEP (calculated)

5.394

GRAVY (calculated)

-0.550

Length

299 amino acids

Sequence
(BLAST)

001: METRCSSMAA VFFFVAALMA SSSTSAVPTQ SFEENFNIMW SENHFTTSED GQIWNLALDN DTGCGFQTKH MYRFGWFSMK LKLVGGDSAG VVTAYYMCSE
101: NGAGPERDEI DFEFLGNRTG EPYIIQTNVF KNGTGNREMR HSLWFDPTKD YHTYSILWNN HQLVFFVDRV PIRVYKNSDK VPNNDFFPNQ KPMYLFSSIW
201: NADDWATRGG LEKTDWKKAP FVSSYKDFAV EGCRWKDPFP ACVSTTTENW WDQYDAWHLS KTQKMDYAWV QRNLVVYDYC KDRERFPKMP WECSISPWA

Best Arabidopsis Sequence Match ( AT1G11545.1 )
(BLAST)

001: METERRIITS CSAMTALFLF MTALMASSSI AATPTQSFED NFNIMWSENH FTTSDDGEIW NLSLDNDTGC GFQTKHMYRF GWFSMKLKLV GGDSAGVVTA
101: YYMCSENGAG PERDEIDFEF LGNRTGQPYI IQTNVYKNGT GNREMRHSLW FDPTKDYHTY SILWNNHQLV FFVDRVPIRV YKNSDKVPNN DFFPNQKPMY
201: LFSSIWNADD WATRGGLEKT DWKKAPFVSS YKDFAVEGCR WKDPFPACVS TTTENWWDQY DAWHLSKTQK MDYAWVQRNL VVYDYCKDSE RFPTLPWECS
301: ISPWA

Arabidopsis Description

XTH8Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178W0W2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.