CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59999	Canola	extracellular	93.08	97.98
CDY67487	Canola	extracellular	96.54	96.54
Bra002719.1-P	Field mustard	extracellular	96.92	89.05
AT5G57560.1	Thale cress	extracellular	92.31	84.51
CDY02741	Canola	extracellular	91.15	80.61
CDX89393	Canola	extracellular	85.38	77.35
CDX94413	Canola	extracellular	85.0	77.0
CDY39193	Canola	extracellular	70.38	67.28
CDX72228	Canola	extracellular	71.15	66.31
CDY66832	Canola	extracellular	68.46	65.68
CDY28174	Canola	extracellular	71.15	65.6
CDX68640	Canola	extracellular	71.15	65.6
KRH19136	Soybean	nucleus	70.38	64.66
CDY14905	Canola	extracellular	67.31	64.58
VIT_11s0052g01220.t01	Wine grape	extracellular	70.38	64.21
CDX72227	Canola	extracellular	66.15	63.47
KRH37378	Soybean	nucleus	62.31	60.9
PGSC0003DMT400036329	Potato	extracellular	65.38	60.28
CDY25904	Canola	extracellular	64.62	59.15
CDY67778	Canola	extracellular	64.62	59.15
Solyc05g046290.2.1	Tomato	extracellular	64.62	58.33
VIT_11s0052g01250.t01	Wine grape	extracellular	64.62	58.13
Solyc07g009380.2.1	Tomato	extracellular, nucleus	60.38	57.09
CDY03539	Canola	endoplasmic reticulum, extracellular	68.46	57.05
CDY11863	Canola	extracellular	60.0	54.55
CDY67488	Canola	extracellular	59.23	54.42
CDY69806	Canola	extracellular	59.23	54.23
CDX88627	Canola	extracellular	59.62	54.2
CDY02738	Canola	extracellular, nucleus, vacuole	44.62	53.95
CDY67779	Canola	extracellular	59.23	53.85
CDY59998	Canola	extracellular	57.31	52.65
CDY49308	Canola	extracellular	63.46	52.55
CDY27126	Canola	extracellular	57.69	51.9
CDY50186	Canola	extracellular	56.92	51.75
CDY61576	Canola	vacuole	55.38	51.43
CDX92733	Canola	extracellular	56.54	51.4
KRH12375	Soybean	extracellular	62.31	51.27
CDY13000	Canola	endoplasmic reticulum, extracellular, nucleus	62.31	49.54
CDY12366	Canola	extracellular	53.08	48.59
CDX69621	Canola	vacuole	48.08	42.66
CDY09832	Canola	vacuole	48.08	42.66
CDY06861	Canola	extracellular	47.31	42.12
CDX78542	Canola	vacuole	48.08	41.95
CDY35228	Canola	extracellular	46.92	41.78
CDX70524	Canola	vacuole	47.69	41.61
CDX93096	Canola	extracellular	46.54	41.02
CDX72656	Canola	extracellular, vacuole	45.77	40.75
CDY08756	Canola	extracellular	44.62	40.7
CDY45623	Canola	extracellular	44.62	40.7
CDY69237	Canola	extracellular	46.15	40.68
CDY31620	Canola	extracellular, vacuole	45.77	40.61
CDY53771	Canola	extracellular	43.08	38.62
CDY22110	Canola	extracellular	43.08	38.62
CDY21985	Canola	extracellular	43.08	38.62
CDX90896	Canola	extracellular	42.69	38.28
CDY49788	Canola	extracellular	42.31	36.79
CDX97967	Canola	extracellular	41.92	36.45
CDX71167	Canola	vacuole	41.15	36.03

Protein Annotations

KEGG:00500+2.4.1.20	Gene3D:2.60.120.200	MapMan:50.2.4	GO:A0A078GMR7	UniProt:A0A078GMR7	InterPro:Beta_glucanase
EnsemblPlants:CDY25903	ProteinID:CDY25903	ProteinID:CDY25903.1	InterPro:ConA-like_dom_sf	InterPro:GH16	InterPro:GH16_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006073
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009408	GO:GO:0009409	GO:GO:0009605
GO:GO:0009612	GO:GO:0009628	GO:GO:0009719	GO:GO:0009733	GO:GO:0009741	GO:GO:0009987
GO:GO:0010411	GO:GO:0016043	GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0042546	GO:GO:0048046	GO:GO:0071555	EnsemblPlantsGene:GSBRNA2T00033377001	InterPro:IPR000757
PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	PRINTS:PR00737	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF20	SUPFAM:SSF49899	SignalP:SignalP-noTM	UniParc:UPI0004EF4690	InterPro:XET_C
InterPro:XTH	SEG:seg	:	:	:	:

Description

BnaC09g32750DXyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078GMR7]

Coordinates

chrLK032182:+:261162..262324

Molecular Weight (calculated)

29360.5 Da

IEP (calculated)

5.064

GRAVY (calculated)

-0.460

Length

260 amino acids

Sequence
(BLAST)

001: MANSYLFPLF LSLIVISSVS ANFQRDVEIT WGDGRGQITN NGELLTLSLD KSSGSGFQSK NEYLFGKIDM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNLSGDP YTLHTNVYTQ GKGDKEQQFK LWFDPTADFH TYTILWNPQR IIFTVDGTPI REFKNMESVG TLFPNNQPMR MYSSLWNADD WATRACVWSN
201: GKSSCPNGSG QGTSGSWLSQ ELDSTAQERM RWVQKNYMIY NYCTDTKRFP QGLPKECLAA

Best Arabidopsis Sequence Match ( AT5G57560.1 )
(BLAST)

001: MAITYLLPLF LSLIITSSVS ANFQRDVEIT WGDGRGQIKN NGELLTLSLD KSSGSGFQSK NEYLFGKVSM QMKLVPGNSA GTVTTLYLKS PGTTWDEIDF
101: EFLGNSSGEP YTLHTNVYTQ GKGDKEQQFK LWFDPTANFH TYTILWNPQR IIFTVDGTPI REFKNMESLG TLFPKNKPMR MYSSLWNADD WATRGGLVKT
201: DWSKAPFTAS YRGFQQEACV WSNGKSSCPN ASKQGTTTGS WLSQELDSTA QQRMRWVQRN YMIYNYCTDA KRFPQGLPKE CLAA

Arabidopsis Description

XTH22Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQX4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.