Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78542 | Canola | vacuole | 97.99 | 97.99 |
| Bra006220.1-P | Field mustard | vacuole | 96.31 | 97.95 |
| CDX69621 | Canola | vacuole | 91.95 | 93.52 |
| CDY09832 | Canola | vacuole | 91.95 | 93.52 |
| AT5G13870.2 | Thale cress | extracellular, vacuole | 90.94 | 92.49 |
| GSMUA_Achr8P34300_001 | Banana | cytosol | 75.17 | 81.75 |
| CDY69237 | Canola | extracellular | 75.5 | 76.27 |
| CDX93096 | Canola | extracellular | 75.5 | 76.27 |
| VIT_01s0150g00460.t01 | Wine grape | extracellular | 77.85 | 75.57 |
| TraesCSU01G175000.1 | Wheat | vacuole | 72.15 | 73.13 |
| TraesCS4D01G142800.1 | Wheat | extracellular | 71.81 | 72.79 |
| TraesCS4A01G172600.1 | Wheat | unclear | 71.81 | 72.79 |
| Zm00001d052651_P001 | Maize | extracellular | 71.14 | 71.38 |
| Os11t0539200-01 | Rice | extracellular | 70.13 | 70.85 |
| HORVU4Hr1G028720.1 | Barley | extracellular, vacuole | 71.48 | 70.53 |
| OQU83588 | Sorghum | extracellular | 71.48 | 70.3 |
| CDY39193 | Canola | extracellular | 47.65 | 52.21 |
| CDY02738 | Canola | extracellular, nucleus, vacuole | 37.58 | 52.09 |
| CDY61576 | Canola | vacuole | 48.66 | 51.79 |
| CDY28174 | Canola | extracellular | 48.99 | 51.77 |
| CDY66832 | Canola | extracellular | 46.98 | 51.66 |
| CDY14905 | Canola | extracellular | 46.98 | 51.66 |
| CDX72228 | Canola | extracellular | 48.32 | 51.61 |
| CDX68640 | Canola | extracellular | 48.66 | 51.42 |
| CDX72227 | Canola | extracellular | 46.64 | 51.29 |
| CDY27126 | Canola | extracellular | 49.66 | 51.21 |
| CDX94413 | Canola | extracellular | 48.99 | 50.87 |
| CDX89393 | Canola | extracellular | 48.66 | 50.52 |
| CDY08756 | Canola | extracellular | 47.32 | 49.47 |
| CDY45623 | Canola | extracellular | 47.32 | 49.47 |
| CDY22110 | Canola | extracellular | 47.65 | 48.97 |
| CDY21985 | Canola | extracellular | 47.65 | 48.97 |
| CDY53771 | Canola | extracellular | 47.65 | 48.97 |
| CDX90896 | Canola | extracellular | 47.65 | 48.97 |
| CDY25904 | Canola | extracellular | 46.64 | 48.94 |
| CDY67778 | Canola | extracellular | 46.64 | 48.94 |
| CDY49788 | Canola | extracellular | 48.66 | 48.49 |
| CDY67779 | Canola | extracellular | 46.31 | 48.25 |
| CDY59999 | Canola | extracellular | 39.93 | 48.18 |
| CDX97967 | Canola | extracellular | 48.32 | 48.16 |
| CDY67488 | Canola | extracellular | 45.64 | 48.06 |
| CDY11863 | Canola | extracellular | 45.97 | 47.9 |
| CDY25903 | Canola | extracellular | 41.61 | 47.69 |
| CDX72656 | Canola | extracellular, vacuole | 46.64 | 47.6 |
| CDX88627 | Canola | extracellular | 45.64 | 47.55 |
| CDY67487 | Canola | extracellular | 41.28 | 47.31 |
| CDY31620 | Canola | extracellular, vacuole | 46.31 | 47.1 |
| CDY59998 | Canola | extracellular | 43.96 | 46.29 |
| CDY69806 | Canola | extracellular | 43.96 | 46.13 |
| CDY03539 | Canola | endoplasmic reticulum, extracellular | 47.32 | 45.19 |
| CDY50186 | Canola | extracellular | 43.29 | 45.1 |
| CDX92733 | Canola | extracellular | 43.29 | 45.1 |
| CDY35228 | Canola | extracellular | 41.95 | 42.81 |
| CDX71167 | Canola | vacuole | 42.62 | 42.76 |
| CDY49308 | Canola | extracellular | 44.97 | 42.68 |
| CDY12366 | Canola | extracellular | 40.6 | 42.61 |
| CDY06861 | Canola | extracellular | 41.28 | 42.12 |
| GSMUA_Achr7P02620_001 | Banana | endoplasmic reticulum, extracellular | 62.08 | 41.86 |
| CDY13000 | Canola | endoplasmic reticulum, extracellular, nucleus | 44.97 | 40.98 |
| CDY02741 | Canola | extracellular | 39.93 | 40.48 |
Protein Annotations
| KEGG:00500+2.4.1.20 | Gene3D:2.60.120.200 | MapMan:50.2.4 | GO:A0A078C2W9 | EnsemblPlants:CDX70524 | ProteinID:CDX70524 |
| ProteinID:CDX70524.1 | InterPro:ConA-like_dom_sf | InterPro:GH16 | InterPro:GH16_AS | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 |
| GO:GO:0006073 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0016762 | GO:GO:0016787 | GO:GO:0030312 | GO:GO:0042546 | GO:GO:0048046 |
| GO:GO:0071555 | EnsemblPlantsGene:GSBRNA2T00140355001 | InterPro:IPR000757 | PFAM:PF00722 | PFAM:PF06955 | PIRSF:PIRSF005604 |
| ScanProsite:PS01034 | PFscan:PS51762 | PANTHER:PTHR31062 | PANTHER:PTHR31062:SF97 | SUPFAM:SSF49899 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EF30F5 | InterPro:XET_C | InterPro:XTH | : | : |
Description
BnaC03g06080D
Coordinates
chrLK031791:-:869643..870977
Molecular Weight (calculated)
34744.4 Da
IEP (calculated)
9.832
GRAVY (calculated)
-0.556
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVIKMGRLP LTFCLTFLLM ATVTFGAPPK KSIDVPFGRN YFPTWAFDHI KYLNGGSEVH LVLDKHTGTG FQSKGSYLFG HFSMHIKMVP GDSAGTVTAF
101: YLSSQNSEHD EIDFEFLGNR TGQPYILQTN VFTGGKGNRE QRINLWFDPS KNYHSYSVLW NMHQIVFFVD DVPIRVFKNS KDIGVKFPFN QPMKIYSSLW
201: NADDWATRGG LEKTNWAKAP FIASYRGFHI DGCEASVNAK YCETQGKRWW DKKEFQDLDA KQYKRLKWVR KRYTNYNYCT DRVRFPKPPP ECRRDRDI
101: YLSSQNSEHD EIDFEFLGNR TGQPYILQTN VFTGGKGNRE QRINLWFDPS KNYHSYSVLW NMHQIVFFVD DVPIRVFKNS KDIGVKFPFN QPMKIYSSLW
201: NADDWATRGG LEKTNWAKAP FIASYRGFHI DGCEASVNAK YCETQGKRWW DKKEFQDLDA KQYKRLKWVR KRYTNYNYCT DRVRFPKPPP ECRRDRDI
001: MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI
Arabidopsis Description
XTH5Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.