Factsheet for AT5G13870.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 7
vacuole 5
plasma membrane 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008796.1-P	Field mustard	cytosol, extracellular, nucleus	90.78	95.34
CDX69621	Canola	vacuole	94.2	94.2
CDY09832	Canola	vacuole	93.86	93.86
Bra006220.1-P	Field mustard	vacuole	93.17	93.17
CDX78542	Canola	vacuole	93.17	91.61
CDX70524	Canola	vacuole	92.49	90.94
GSMUA_Achr8P34300_001	Banana	cytosol	76.11	81.39
VIT_01s0150g00460.t01	Wine grape	extracellular	79.86	76.22
AT2G06850.1	Thale cress	extracellular	76.45	75.68
TraesCSU01G175000.1	Wheat	vacuole	75.43	75.17
TraesCS4A01G172600.1	Wheat	unclear	75.09	74.83
TraesCS4D01G142800.1	Wheat	extracellular	74.74	74.49
Zm00001d052651_P001	Maize	extracellular	74.06	73.06
Os11t0539200-01	Rice	extracellular	72.7	72.2
HORVU4Hr1G028720.1	Barley	extracellular, vacuole	74.4	72.19
OQU83588	Sorghum	extracellular	73.72	71.29
AT4G30270.1	Thale cress	extracellular	47.44	51.67
AT4G14130.1	Thale cress	extracellular	50.51	51.21
AT3G23730.1	Thale cress	extracellular, vacuole	50.51	50.86
AT4G25810.1	Thale cress	extracellular	49.15	50.35
AT5G57530.1	Thale cress	extracellular	48.46	49.82
AT5G65730.1	Thale cress	extracellular	49.49	49.66
AT5G57540.1	Thale cress	extracellular	48.12	49.65
AT5G57550.1	Thale cress	extracellular	47.78	49.3
AT5G57560.1	Thale cress	extracellular	47.1	48.59
AT4G03210.1	Thale cress	extracellular	47.78	48.28
AT1G11545.1	Thale cress	extracellular	49.83	47.87
AT4G37800.1	Thale cress	extracellular, vacuole	47.78	47.78
AT4G25820.1	Thale cress	extracellular	45.05	45.99
AT4G28850.1	Thale cress	extracellular	43.69	43.84
AT2G18800.1	Thale cress	extracellular	45.05	43.28
AT2G14620.1	Thale cress	vacuole	44.03	43.14
GSMUA_Achr7P02620_001	Banana	endoplasmic reticulum, extracellular	63.48	42.08

Protein Annotations

Gene3D:2.60.120.200	MapMan:50.2.4	EntrezGene:831233	UniProt:A0A178UI65	ProteinID:AAD45126.1	EMBL:AB026486
ProteinID:AED91952.1	EMBL:AK176228	ProteinID:ANM69716.1	ProteinID:ANM69717.1	ArrayExpress:AT5G13870	EnsemblPlantsGene:AT5G13870
RefSeq:AT5G13870	TAIR:AT5G13870	RefSeq:AT5G13870-TAIR-G	EnsemblPlants:AT5G13870.2	Unigene:At.364	ProteinID:BAB11115.1
InterPro:ConA-like_dom_sf	Symbol:EXGT-A4	InterPro:GH16	InterPro:GH16_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0006073	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010411	GO:GO:0016043
GO:GO:0016740	GO:GO:0016762	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0042546
GO:GO:0048046	GO:GO:0071555	InterPro:IPR000757	RefSeq:NP_001331375.1	RefSeq:NP_001331376.1	RefSeq:NP_196891.1
ProteinID:OAO92857.1	PFAM:PF00722	PFAM:PF06955	PIRSF:PIRSF005604	ScanProsite:PS01034	PFscan:PS51762
PANTHER:PTHR31062	PANTHER:PTHR31062:SF97	UniProt:Q67Z90	UniProt:Q9XIW1	SUPFAM:SSF49899	SignalP:SignalP-noTM
UniParc:UPI0000048B25	InterPro:XET_C	InterPro:XTH	:	:	:

Description

XTH5Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:Q67Z90]

Coordinates

chr5:-:4474922..4477090

Molecular Weight (calculated)

33951.1 Da

IEP (calculated)

9.018

GRAVY (calculated)

-0.462

Length

293 amino acids

Sequence
(BLAST)

001: MGRLSSTLCL TFLILATVAF GVPPKKSINV PFGRNYFPTW AFDHIKYLNG GSEVHLVLDK YTGTGFQSKG SYLFGHFSMH IKMVAGDSAG TVTAFYLSSQ
101: NSEHDEIDFE FLGNRTGQPY ILQTNVFTGG AGNREQRINL WFDPSKDYHS YSVLWNMYQI VFFVDDVPIR VFKNSKDVGV KFPFNQPMKI YSSLWNADDW
201: ATRGGLEKTN WEKAPFVASY RGFHVDGCEA SVNAKFCETQ GKRWWDQKEF QDLDANQYKR LKWVRKRYTI YNYCTDRVRF PVPPPECRRD RDI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.